Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00961 ATGTGGGCTCAAACCAAGTTGCTGAAATGGCTGATGGGATTAACACATGCTAACTCTACGATTGATGGTTTTCAGGATTCAGGTTTAACAAGGCCAATTAATTTGGCTAATACCATTAATACAGATGAAATAATTGCACCAGAAGTGGTAGCTAATGAGAGAAAAGTTGCTACTCAATATGGCCAAACCAGAAATAATCTAGTCGGTGCTGACATGGATCACGTTGTGACTGATCAGTTTGCCTCCAATAAAGTTGCAGCACCAAATGTTGAAGATTTCTACAACCAATGTGATACTGAGAAGGAGAATTTGTTCTTATATGGATTACCTAATGAGCACTGGGAAGTAAATTTGTTCTGGGCATTAACTTTGCTAAGGATGGCATGCAGGAAAAAGACTGGTTATCTTTAG 411 0.3869 MWAQTKLLKWLMGLTHANSTIDGFQDSGLTRPINLANTINTDEIIAPEVVANERKVATQYGQTRNNLVGADMDHVVTDQFASNKVAAPNVEDFYNQCDTEKENLFLYGLPNEHWEVNLFWALTLLRMACRKKTGYL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00961 136 Pfam Alfin 87 118 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00961 Cca-Chr8 22982701 22983993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00961 84 118 Alfin-like Transcription Factor Family AT3G42790 68.571 5.94e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00961 - - gmx:100170700 58.5362