Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00955 ATGAAAGGATTTTCATGTGTTTCAAATCAATTGAAGAAATCGTTATCTGAGACACTAACTATCTTCTACCCCCTTGGAGGTAGAAGAGGTGATTACTTTTCCATTGATTGCAATGATGAAGGTGCAATTTACATGGAAGCCTCAGTGAATATTAGCATGGGAGAGTTCTTAAATCCACCCAAATTAGAATTTCTTAATCAACTACTTCCATGTGAGCCTAACAAGTGTCACTCCTACCAAGAAGTCTTGCCCCAACTACTAGTCCAAGTGAACCTTTTCCAATGTGGAGGAATAGCTATTGGCTTATGCAACCTTCACATCCTCTTGGATGCATATTCTTGCAGTGCCTTCTTGAAAACTTGGTTTGCCATTTGCAAAGGGTCAAAGGAAGAAATATCATGGCCAGATTTCTTTTCTGCTTCTTCTTTCTTTCCTCCAAGAAACACCTTTGGTGTACGTGCTGGCATGTTAAATATTAACAAAGACTCGAATGTAGAAGCAAAGTGCACTACAAGAAGATTCATGTTTGATTCCAAAATCATCAATGAGCTAAAAGCCATGTCGACCAGTGATGACACAGAACCTACACGATACCAAATAGTGTCTTCATTCATATGTAAACATATGATTGTAGCATGCATGAATGGATCTTGTGATCAAACAAGGCCAGTGGTTGCATTGCATGTTGTGGACATGAGAAAAAGGATGGGAGAGCCTTTCTCAAAAGGTTCTATTGGAAATTTATTGTGGCCTGCATTGGTTCTTTTGGAAGATGTCAACAAGAACACTAATATTATAGATTTAGTTAGAGTTTTGGAAAAAGAATTAGGAAAGCTCACTAAGGAGTTGTTTCTAAAAGTGCAAAATGATCCTGATTTTTTATGGAGTGATGAGTGTGCACAATTAATGCTTGAAGGTATAGCAACACAAAACCCAATTACTTTAGTGTTCACAAGTTGGGCCAACATGGGATTCGACAAGGTGGATTTTGGTAGTGGAAAACCGTTGTGGTTGGCTCAAAGAGGAGGTACTAAAGAAACTATACCAAACACAGTAGTATTGATGGAAACAAAAGAGGGAATAGATGCATGGGTGACAATGGCAGAGAAACATATAACTATCTTGGAAAACGATATGGAATTCCTCCGAATCGCGTTGCTTAATCCTATTGTTTCCAATATTTAA 1185 0.3814 MKGFSCVSNQLKKSLSETLTIFYPLGGRRGDYFSIDCNDEGAIYMEASVNISMGEFLNPPKLEFLNQLLPCEPNKCHSYQEVLPQLLVQVNLFQCGGIAIGLCNLHILLDAYSCSAFLKTWFAICKGSKEEISWPDFFSASSFFPPRNTFGVRAGMLNINKDSNVEAKCTTRRFMFDSKIINELKAMSTSDDTEPTRYQIVSSFICKHMIVACMNGSCDQTRPVVALHVVDMRKRMGEPFSKGSIGNLLWPALVLLEDVNKNTNIIDLVRVLEKELGKLTKELFLKVQNDPDFLWSDECAQLMLEGIATQNPITLVFTSWANMGFDKVDFGSGKPLWLAQRGGTKETIPNTVVLMETKEGIDAWVTMAEKHITILENDMEFLRIALLNPIVSNI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00955 394 Gene3D - 166 385 IPR023213 -
Cca08g00955 394 Gene3D - 2 153 IPR023213 -
Cca08g00955 394 PANTHER F21J9.9 1 391 - -
Cca08g00955 394 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 391 - -
Cca08g00955 394 Pfam Transferase family 7 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00955 Cca-Chr8 22763374 22764558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00955 11 376 Monolignol Biosynthesis Gene Families AT5G48930 24.747 9.50e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00955 - K13065 gmx:102667966 683.715