Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00953 ATGCTGTCTATCATTCCTTTGGATATCTCGCTATCCTCTACTCTTACCAGAATCTCACCTTTCAATACCAGTTTTAAGAAACCAATCTCTTTTGCATCCAAGGTTTCACCTTCCTCTAATGAGTTCTCTCCTCTTTCTCTCCCCCCCTCAGGAATTTGCAGGGCTAGTCAAGTTGTTGATTTGTTCACAACTGTGTCACCCGAAATTATTGTCCGTGAGGCAAGGTTAGTGGATTATTGGGGAGTGGCTGAGACTCACTGCAAGTGCTTCTTCCCTGAATATTCCTTCCCATCAGATTTTCTGCTGAGGATAGACAGATTGGTGGTGGCTGTGTTAGCGGCTATGTTAGCCGGATTCTTTAGGCCAAGAGATTGCAGAAGAATATGTTTGGTGGCTGTTATTGGAAGCTCACTTGATGAATCCTTTTCATTTGGAACTGAGGGTCTCAAGATTGGTAGCTTTGATGGGAAATTCAGCCTCAACAAGGGTTATGTGGCTGGTATTTTAACAGTAGACAATAATGCAGACTTTCTACCAAGAAAAGGGCCACGGCGACATAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGGGAAAATTTTCGGAGGAAGGGAATAGCAAAAAAATTGATAGAAAAGGCAGAGTCTCATGCCAGAAGTTGGGACTGTCGTGCAATTGCATTGCATTGTGACTTAAACAATCCTGTGGCCACAACGTTATACAAAGGCCAAGGTTACAAATGTATCATGGTTCCAGAAGGAGCAAAGTGGCCTCAGCCAAAGACCTCACCAGATATCAGATTCAACTTCATGATGAAACTTCTCAAAAACTCAGCAGCTTCTAATTAG 855 0.4304 MLSIIPLDISLSSTLTRISPFNTSFKKPISFASKVSPSSNEFSPLSLPPSGICRASQVVDLFTTVSPEIIVREARLVDYWGVAETHCKCFFPEYSFPSDFLLRIDRLVVAVLAAMLAGFFRPRDCRRICLVAVIGSSLDESFSFGTEGLKIGSFDGKFSLNKGYVAGILTVDNNADFLPRKGPRRHRRTGIAYISNVAVRENFRRKGIAKKLIEKAESHARSWDCRAIALHCDLNNPVATTLYKGQGYKCIMVPEGAKWPQPKTSPDIRFNFMMKLLKNSAASN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00953 284 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 128 279 IPR000182 GO:0016407
Cca08g00953 284 Pfam Acetyltransferase (GNAT) family 145 248 IPR000182 GO:0016407
Cca08g00953 284 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 64 265 IPR016181 -
Cca08g00953 284 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 281 - -
Cca08g00953 284 CDD NAT_SF 184 231 - -
Cca08g00953 284 Gene3D - 153 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00953 Cca-Chr8 22624679 22628255 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca08g00953 Acetyltransf_1 4e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00953 - - gmx:100803930 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00953 08 22624679 22628255 Cca02g02027 02 40186202 40189650 PCT