Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00944 ATGACAGTTACAATGGCTGCTGGGAATGTCTACAGTTTTGGTGTCATTCTGCTTGAACTGCTAACTGGAAAACCTGCAGTCACTGATGGAATGGAATTGGTCAAGTGGGTTTTAAGTAATCCAACAAACCAAGATTACATTCTTGATTTTAATGTCAGCAGAACATCAGAAGCCATTAGAAACCATATGCTTGCAATTCTCAATATTGCTCTTGTTTGTGTTAGTACATCCCCAGAAGCAAGACCAACAATGAAGAGTGTGCTAGAGATGCTTCTAAATACCAGATGA 288 0.3924 MTVTMAAGNVYSFGVILLELLTGKPAVTDGMELVKWVLSNPTNQDYILDFNVSRTSEAIRNHMLAILNIALVCVSTSPEARPTMKSVLEMLLNTR 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00944 95 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 95 - -
Cca08g00944 95 SUPERFAMILY Protein kinase-like (PK-like) 9 91 IPR011009 -
Cca08g00944 95 Gene3D Transferase(Phosphotransferase) domain 1 3 94 - -
Cca08g00944 95 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00944 Cca-Chr8 22264501 22264788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00944 1 91 Receptor kinase-like Gene Family AT2G41820 46.939 1.76e-18 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Cca08g00944 PK_Tyr_Ser-Thr 3.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00944 - - ccaj:109796745 179.874