Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00934 ATGGAACAACCTCATACCTCGTCACTTCACGTGGAGACAGAAGCACCTGAACCTAGTCCGCTCCGAAAAATGGTGGCCGTGTCGTCAATCGCGGCGGGAGTCCAATTTGGGTGGGCCCTACAACTGTCTCTCCTAACTCCCTACGTTCAGACGCTGGGCGTCCCTCACGCGTGGGCCTCCTTCATCTGGCTCTGCGGCCCAATCTCGGGCCTGGTGGTCCAGCCCATTGTGGGCTACACCAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGCCGCCCCTTCATCCTCGCCGGCGCCCTCGCCGTCGCCCTCGCCGTCTTTCTCATCGGCTACGCCGCCGACATCGGCCACGCCGCCGGCGACGACATCACCAAGAAAACCCGCCCCCACGCGGTCGCCGTCTTCGTCGTGGGCTTCTGGATCCTCGACGTCGCCAACAACATGCTCCAAGGCCCGTGCCGCGCCTTCCTGGGCGACCTCGCCGCCGGCGACCACCGCAAAACGCGAACCGCCAACGCCTTCTTCTCCTTCTTCATGGCCATCGGCAACGTCCTCGGATACGCAGCGGGCTCATACGACAAGCTCCACCGCGTTTTCCCCTTCACGGAAACCTCCGCGTGCAACGTGTTCTGCGCCAATCTCAAAAGctgcttcttcttctcaatcttcctcttgctcgttctcatcctcatcgtcttGGTCACCGTCAACGACCCCCAATTCACGCCCAACCAGGCCATCCAAAACGACGACGTCGCAGCGCTGGGGTCACGGTTTTCGTGCTTCGACCAGGTGGTGGGCGCGTTTAAGGACCTCAAGGGCCCCATGTGGATGCTGATGCTGGTCACCGCTGTCAACTGGTTCGCGTGGTTCCCCTACGTGCTCTTCGACACCGATTGGATGGGCCGCGAGGTGTACGGTGGCGACGTGGGCCAGACCGCATACGATAGAGGCGTGCATGCGGGCTCATTGGGCCTCATGCTAAACTCCGTCGTTTTGGCTCTCATGTCGCTCGCGGTTGAGCCCCTCGGTCGTCTCGTTGGCGGCGTTAAGTGGCTTTGGGGAATCGTTAACGTTGTTCTCGCCGTTTGCATGGCCATGACGGTCGTTATCTCCAAGGCTGCGGAACACGAACGCCGTCACGGCGTTCCCGTTGGGTACCCTTCACTCGGTGTCAGAGCTGGTGCATTGACTTTCTTCTCCGTCCTCGGAATCCCTCTCGCCATTACTTACAGCGTTCCATTCGCTCTGGCATCTATATATTCCAGCACATCAGGGGCAGGCCAAGGGTTATCTCTGGGTCTCCTCAATGTGGCAATTGTCGTGCCACAGATGATAATATCGGGAATAAGTGGACCGATTGACAAAAAGTTTGGTGGAGGCAACTTGCCGGCGTTTGTGTTGGGCACGGTGGCGGCCGCCATCAGCGCCGTCTTGGCGATTGTTCTTCTGCCGACTCCGAAGCCGCCGGCCGATGGGGACAAGGTTGCCGCCATCCCCGCACCACCGAGTTTCCATTAG 1521 0.5891 MEQPHTSSLHVETEAPEPSPLRKMVAVSSIAAGVQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLVVQPIVGYTSDRCTSRFGRRRPFILAGALAVALAVFLIGYAADIGHAAGDDITKKTRPHAVAVFVVGFWILDVANNMLQGPCRAFLGDLAAGDHRKTRTANAFFSFFMAIGNVLGYAAGSYDKLHRVFPFTETSACNVFCANLKSCFFFSIFLLLVLILIVLVTVNDPQFTPNQAIQNDDVAALGSRFSCFDQVVGAFKDLKGPMWMLMLVTAVNWFAWFPYVLFDTDWMGREVYGGDVGQTAYDRGVHAGSLGLMLNSVVLALMSLAVEPLGRLVGGVKWLWGIVNVVLAVCMAMTVVISKAAEHERRHGVPVGYPSLGVRAGALTFFSVLGIPLAITYSVPFALASIYSSTSGAGQGLSLGLLNVAIVVPQMIISGISGPIDKKFGGGNLPAFVLGTVAAAISAVLAIVLLPTPKPPADGDKVAAIPAPPSFH 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00934 506 PANTHER SUGAR TRANSPORTER 3 492 - -
Cca08g00934 506 Gene3D MFS general substrate transporter like domains 18 485 IPR036259 -
Cca08g00934 506 CDD MFS_SLC45_SUC 24 481 - -
Cca08g00934 506 Pfam MFS/sugar transport protein 36 251 - -
Cca08g00934 506 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 3 492 - -
Cca08g00934 506 TIGRFAM GPH_sucrose: sucrose/H+ symporter 20 489 IPR005989 GO:0005887|GO:0008515|GO:0015770
Cca08g00934 506 SUPERFAMILY MFS general substrate transporter 22 489 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00934 Cca-Chr8 21829437 21836757 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00934 1 495 Sucrose Transporter Gene Family AT1G22710 63.241 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00934 K15378 - gmx:100782007 776.548