Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00931 ATGGAGGAGCCACAAGCAGGACCCAGCCCCCTTCCAAAAATGATTGCGGTGTCATCAATTGCCGCAGGTATCCAATTTGGTTGGGCCCTACAACTCTCACTATTAACCCCATACGTTCAAACCCTAGGCGTCCCTCACGCTTGGTCCTCATTCATTTGGCTCTGTGGCCCAATCTCGGGGCTGCTAGTCCAGCCCCTTGTAGGCTATAGCAGCGACCACTGCACCTCTCGCTTTGGCCGTCGCCGACCTTTTATAATGgccggtgctgttgccgtcgccgttgctgttgTTCTCATCGGCTTCGCAGCCGATATAGGACAAGCAACAGGCGACGACATGACAAAGAAGACCCGGCCACGAGCAGTTGCCTGCTTCGTGGTCGGCTTTTGGATCCTGGATGTGGCGAACAACATGCTCCAGGGTCCTTGCCGTGCCTTCCTCGGTGATCTGGCTGCCGGCGACCAGAAGAAGATAAGGACAGCGAACTCGTTCTTCTCGTTCTTCATGGCCGTCGGCAACATTCTTGGCTACGCCGCGGGCTCCTATGACGGCCTCCACCACCTCTTCCCCTTCACGCAGACGGAGGCGTGCAACGTGTTCTGCGCAAACCTTAAGAGCTGTTTCTTCTTCTCAATCTTTCTCCTCCTCGTCATTTGCATCATAGTCCTGTTGACCGTGGACGATCCACAGTACACGCCAGCAGAGACCGATGCAAAAGACGAAGGGAACACGCACTACACATGCTTCATGGGAGAGTTGTGCGTTGCCTTCAAGGAGTTGAAGAGGCCCATGTGGATCCTCATGTTTGTGACTGCCATCAACTGGGTCGCGTGGTTCCCATACATGTTGTACGACACTGACTGGATGGGTCGTGAGGTGTACGGTGGTGACGTGGGGCAGAAGGCATACGATGCTGGTGTTCATGAGGGCTCTTTGGGTCTCATGCTCAACTCTGTCGTTTTGGCTTTGATGTCTTTGGCGATTGAGCCTTTGGGTCGTTTGGTAGGAGGAGTAAAGTGGCTGTGGGGAATCGTCAACGTTATTCTCGCGGTTTGCATGGCAATGACAGTAGTAATTACGAAGATCGCTGAGAAAGAACGACATCTAAACCCTGCATTAATTGGAGACCCTTCCTTTGGAGTCAAAGTTGGTTCCCTGGCCTTCTTCGGCGTCCTTGGTATTCCTCTTGCGATTACTTTTAGTGTGCCATTTGCCCTAGCATCTATATACTCAAGCTCATCAGGAGCAGGCCAAGGCTTGTCTCTGGGTGTTCTCAATATTGCAATTGTCATACCACAGATGATAGTGTCGACGATAAGCGGACCGTGGGATGCGTGGTTCGGCGGTGGCAACTTGCCGGCGTTTGTGTTGGGAGCGGTGGCGCCAGCCGTGAGTGCCATACTGGCAATCATGCTGTTGCCAACTCCGAAACCAGCTGAGGAGGCCAAGGCTTCAACCCTCTCTATGGGGAGTTTCCATTAA 1482 0.5202 MEEPQAGPSPLPKMIAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWSSFIWLCGPISGLLVQPLVGYSSDHCTSRFGRRRPFIMAGAVAVAVAVVLIGFAADIGQATGDDMTKKTRPRAVACFVVGFWILDVANNMLQGPCRAFLGDLAAGDQKKIRTANSFFSFFMAVGNILGYAAGSYDGLHHLFPFTQTEACNVFCANLKSCFFFSIFLLLVICIIVLLTVDDPQYTPAETDAKDEGNTHYTCFMGELCVAFKELKRPMWILMFVTAINWVAWFPYMLYDTDWMGREVYGGDVGQKAYDAGVHEGSLGLMLNSVVLALMSLAIEPLGRLVGGVKWLWGIVNVILAVCMAMTVVITKIAEKERHLNPALIGDPSFGVKVGSLAFFGVLGIPLAITFSVPFALASIYSSSSGAGQGLSLGVLNIAIVIPQMIVSTISGPWDAWFGGGNLPAFVLGAVAPAVSAILAIMLLPTPKPAEEAKASTLSMGSFH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00931 493 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 6 481 - -
Cca08g00931 493 Gene3D MFS general substrate transporter like domains 12 489 IPR036259 -
Cca08g00931 493 SUPERFAMILY MFS general substrate transporter 14 479 IPR036259 -
Cca08g00931 493 Pfam MFS/sugar transport protein 20 278 - -
Cca08g00931 493 PANTHER SUGAR TRANSPORTER 6 481 - -
Cca08g00931 493 TIGRFAM GPH_sucrose: sucrose/H+ symporter 10 477 IPR005989 GO:0005887|GO:0008515|GO:0015770
Cca08g00931 493 CDD MFS_SLC45_SUC 14 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00931 Cca-Chr8 21766270 21768171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00931 3 493 Sucrose Transporter Gene Family AT1G22710 62.151 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00931 K15378 - gmx:100785899 801.201