Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00930 ATGGAGCCTCCAACTTCCACCAAACCTCACGACACCACAAAACCTTCTACCCTAAGTGTGGAGGTCAGCCAGGCTAAGCCGAGCCCACTCCGAAAAATGTTTGCCGTGGCATCTATAGCCGCCGGCATACAATTTGGGTGGGCTCTGCAGCTCTCCTTGCTGACCCCCTACTCACAACTCCTAGGAGTACCACACATGTGGTCTTCCTTCATCTGGTTGTGCGGTCCTATCTCTGGTCTGGTCGTGCAACCCATTGTGGGTTACTATAGCGATCGTAGCACCTCACGCTTCGGTCGTCGTCGTCCCTTCATCTTAGCAGGCTCTCTAGCCGTCGCCATAGCGGTGTTCTTAATCGGCTATGCAGCCGATATAGGACACGCAGCTGGCGACGACTTGAAGAAAAAAACCCGCCCAAGAGCCGTTGCCATTTTTGTCATCGGTTTCTGGATCCTTGACGTGGCTAACAACATGCTACAAGGACCCTGCCGTGCCTTTCTGGGCGATCTCGCTGCCGGCGACCATAAAAAAACGAGAGTCGCCAACGGGTTCTTCTCGTTTTTCATGGCCGTCGGCAACGTGTTGGGATACGCGGCAGGGTCCTTGAAGGGTCTGCATAAGATCTTCCCATTCACGGAAACGAAAGCGTGTGACGTGTTCTGCGCTAATCTGAAAAGCTGTTTCTTCTTCTCCATCTTGTTGCTGCTCGTGTTGGCGACAGCGGCGCTTATTTACGTGACGGACGAGGCGGTGGCGGCACGTGAGGTGGAGGAGGGGGAGGTGCAACCCTCGTGCTTCTCTCAGCTATTCGGTGCGTTGAAGGAGTTGAAGAAACCCATGTGGATGCTCATGTTGGTCACAGCGGTCAACTGGGTGGGGTGGTTTCCCTACTTTTTGTTCGACACCGATTGGATGGGGCGTGAGGTCTACGGTGGGAACGCAGGAGAGGAAGCTTACGCTGCGGGTGTACGAGTGGGGTCGCTGGGGCTCATGATAAACGCCGTCGTTTTGGGGTTCATGTCGCTGGCGGTGGAGCCTTTGGGCCGCATGGTGGGAGGAGTGAAGAGGCTCTGGGGGATCGTAAACTTTATACTCGCGATTGGGTTCGGAATGACGGTGGTTATCACCAAGGTGGCGGAGCACCAGCGGCGGTTGAACCCCGCCGCCGTCGGACACCCCTCCGACGCCGTCAAAGTTAGCTCCTTGGTCTTCTTCGGGGTTCTCGGAATCCCTCTCGCGATTACTTTCAGTGTTCCTTTTGCTCTAGCATCAATATACTCCAGCTCTTCTGGGGCAGGCCAAGGTTTATCTTTGGGAGTCCTCAATCTTGCAATTGTTGTGCCCCAGATGGTGGTGGCTGCATTAAATGGTCCATGGGATTCCTTGTTTGGTGGTGGCAACTTGCCGGCTTTCATGGTGGGTGCGGTGGCGGCGGCGCTGAGTGCCATAATGGCGATTGTCTTGCTGCCAACTCCAAAGCCAGCTGAAGAGGCCAAGGCTGCAAGCATGGCCACAGGGGGCTTTCACTAG 1527 0.5547 MEPPTSTKPHDTTKPSTLSVEVSQAKPSPLRKMFAVASIAAGIQFGWALQLSLLTPYSQLLGVPHMWSSFIWLCGPISGLVVQPIVGYYSDRSTSRFGRRRPFILAGSLAVAIAVFLIGYAADIGHAAGDDLKKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDHKKTRVANGFFSFFMAVGNVLGYAAGSLKGLHKIFPFTETKACDVFCANLKSCFFFSILLLLVLATAALIYVTDEAVAAREVEEGEVQPSCFSQLFGALKELKKPMWMLMLVTAVNWVGWFPYFLFDTDWMGREVYGGNAGEEAYAAGVRVGSLGLMINAVVLGFMSLAVEPLGRMVGGVKRLWGIVNFILAIGFGMTVVITKVAEHQRRLNPAAVGHPSDAVKVSSLVFFGVLGIPLAITFSVPFALASIYSSSSGAGQGLSLGVLNLAIVVPQMVVAALNGPWDSLFGGGNLPAFMVGAVAAALSAIMAIVLLPTPKPAEEAKAASMATGGFH 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00930 508 CDD MFS_SLC45_SUC 33 485 - -
Cca08g00930 508 Pfam MFS/sugar transport protein 33 293 - -
Cca08g00930 508 PANTHER SUGAR TRANSPORTER 22 495 - -
Cca08g00930 508 Gene3D MFS general substrate transporter like domains 25 502 IPR036259 -
Cca08g00930 508 MobiDBLite consensus disorder prediction 1 21 - -
Cca08g00930 508 TIGRFAM GPH_sucrose: sucrose/H+ symporter 29 492 IPR005989 GO:0005887|GO:0008515|GO:0015770
Cca08g00930 508 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 22 495 - -
Cca08g00930 508 SUPERFAMILY MFS general substrate transporter 31 494 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00930 Cca-Chr8 21677908 21681245 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00930 4 508 Sucrose Transporter Gene Family AT1G22710 62.378 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00930 K15378 - gmx:100784153 819.305