Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00928 ATGGAGCTTCCTCCAACCTCCACCCTGAGCGTGGAGACCATTCAGCCCAAGCCCAGCCCACTTCGTAAAATGTTCGCCGTGGCATCCATAGCTGCGGGCATACAGTTTGGGTGGGCTTTACAGCTCTCCCTATTGACCCCTTACGTGCAACTGTTAGGAGTTCCACACGTGTGGGCCTCCTTCATCTGGCTGTGTGGGCCCATCTCCGGCCTGGTAGTGCAGCCCATTGTGGGTTACTATAGCGATCGTACCACCTCTCGCTTCGGCCGCCGCCGTCCCTTCATCTTAGCAGGCTCCGTCGCGGTTGCCATCGCCGTGTTTCTCATCGGCTACGCAGCGGATATAGGACACGCCATGGGCGACGATTTGAAGAAAAAAACACGCCCCAGAGCGGTCGCGTTTTTCGTCATAGGTTTCTGGATTCTTGACGTGGCTAATAACATGTTGCAAGGACCCTGTCGTGCCTTTTTAGCTGATCTGGCTGCCGGCGACCATAAAAAGACGAGAGTGGCCAACGGGTTCTTCTCGTTTTTCATGGCCATCGGCAACGTGCTGGGGTACGCGGCAGGGTCGTGGAACGGTCTGCACAGGATCTTCCCGTTCACGGAAACGAAAGCGTGTGACGTGTTCTGCGCTAATCTGAAAAGCTGTTTCTTCTTCTCCATCTTGTTGCTGCTCGTGTTGGCGACAGTGGCGCTTATTTACGTGACGGACGAGGCGGTGGCGGCACGTGAGGTGGAGGAGGGGGAGGTGCAACCCTCGTGCTTCTCTCAGCTATTCGGTGCGTTGAAGGAGTTGAAGAAACCCATGTGGATGCTCATGGGAGGATGCGTACGCTGCGGGCGTGAGAGCGGGGTCGCTGGGGCTCATGATAAACGCCATCGTTTTGGGGTTCATGTCGCTGGCGGTGGAGCCTTTGGGCCGCATTGTGGGAGGCGTGAAGACGCTCTGGGGGATTGTAAACTTTATACTCGCGATTGGGTTCGTAATGACCTTGGTTATCACCAAGGCGGCGGAGCACCAGCGGCGGTGGGAGCGCCGCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCGCCGCCGTCGGACACCCCTCCGCCGCCGTCAAAGTTGGCTCCTTGGTCTTCTTCGGGGTTCTCGGAATCCCTCTCGCGATTAATTTCAGTGTTCCTTTTGCTCTAGCATCCATATACTGCAGCTCTTCTGGGGCAGGCCAAGGTTTATCTTTGGGAGTCCTCAATCTTGCAATTGTTTTACCACAGATGGTGGTGTCTGCATTAAGTGGTCCATGGGATAACTTGTTTGGTGGTGGCAACTTGCCGGCTTTCATGGTGGGTGCGGTGGCGGCGGCGCTGAGCGCCGTCATGGCGATTATCCTCCTGCCAACTCCAGAGCCAGCTGAAGAGGCCAAGGCTGCAAACATGGCCTCAGGGGGTTTTCACTAG 1638 0.4921 MELPPTSTLSVETIQPKPSPLRKMFAVASIAAGIQFGWALQLSLLTPYVQLLGVPHVWASFIWLCGPISGLVVQPIVGYYSDRTTSRFGRRRPFILAGSVAVAIAVFLIGYAADIGHAMGDDLKKKTRPRAVAFFVIGFWILDVANNMLQGPCRAFLADLAAGDHKKTRVANGFFSFFMAIGNVLGYAAGSWNGLHRIFPFTETKACDVFCANLKSCFFFSILLLLVLATVALIYVTDEAVAAREVEEGEVQPSCFSQLFGALKELKKPMWMLMGGCVRCGRESGVAGAHDKRHRFGVHVAGGGAFGPHCGRREDALGDCKLYTRDWVRNDLGYHQGGGAPAAVGAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAVGHPSAAVKVGSLVFFGVLGIPLAINFSVPFALASIYCSSSGAGQGLSLGVLNLAIVLPQMVVSALSGPWDNLFGGGNLPAFMVGAVAAALSAVMAIILLPTPEPAEEAKAANMASGGFH 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00928 545 Pfam MFS/sugar transport protein 24 277 - -
Cca08g00928 545 Gene3D MFS general substrate transporter like domains 17 281 IPR036259 -
Cca08g00928 545 SUPERFAMILY MFS general substrate transporter 22 276 IPR036259 -
Cca08g00928 545 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 424 532 - -
Cca08g00928 545 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 13 274 - -
Cca08g00928 545 PANTHER SUGAR TRANSPORTER 424 532 - -
Cca08g00928 545 PANTHER SUGAR TRANSPORTER 13 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00928 Cca-Chr8 21407734 21410876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00928 429 526 Sucrose Transporter Gene Family AT5G06170 67.347 2.98e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00928 K15378 - gmx:100784153 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00928 08 21407734 21410876 Cca02g02086 02 40993290 40996602 PCT