Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00917 ATGTTCCTCAAAACCCACTTTCTGTTCCTCGTTCTTGTTTTAGCAACCACCGCCGTCGCCACCGCCATAGACCTTGGTTCCACTCTCTCAGCCTCTTCCCGCAACCAGACGTGGTCTTCTACCGACGCCTCCTACTCTCTGGGTTTCGTCTCCGTTCAGCCACCGACCACCCCTCCTTCCTACACCGCCGCCATCGTCTACTCCGGCGGCGCCCCCGTCGTCTGGTCTGCCGGCAACGGCGCCGCCGTGGACTCCGGCGGGTCCCTCCAGTTCCTCCGCAACGGCGCCCTCCGCCTCGTGAACGGCTCCGGCGCCACCGTGTGGGACTCCGGCACGGCGGACCTTGGCGCCACGTCAGCAACCCTTGAAGAGAGTGGCAATTTGGTAATTTCGAACGGCACGGGTACCCTCTGGTCAAGCTTTGACCACCCCACTGATACTATTTTGCCTTCTCAGAATTTCAGTGTTGGTAAGTCTCTCACATCTCAAAGTTACTCTTTTGGTCTTAGTTCAATTGGGAATTTGACTCTGAACTGGAACAATAGCATAGTGTACTGGACCCAGGGTTTGAACTCTTCTGTGAATGTGAGTTTGGATTCCCCTGTGTTGGGGTTGACATCAATTGGCATTTTGCAACTTTCTGATGCCAAATTGAGCACTCCTGTTGTTATTGCTTATAGTAGTGACTATGCTGAGGGGAATAGTGATGTGTTGAGGGTGTTGAAGTTGGACAATGATGGCAATTTGAGAATTTATAGCACCAATAAGGGTAGTGCAAGTTCTAGTGCTAGATGGACTGCTGTGTTGGATCAGTGTGAGGTTTATGCTTACTGTGGGAACTATGGTGTGTGTAGTTACAATGATTCAAGCCCGATTTGCGGGTGCCCTTCGGAGAATTTCGAAATGGTTGATCCAAATGATGCTAGGAAAGGTTGCAGGAGGAAGGCAAGTCTCGACAGTTGTCAAGGGAGTGCGACTATGTTGACACTGGATCATGCTGTGATCTTGAGTTATCCCCCTGAGGCTGCATCGCAGTCGTTTTTCATAGGGATATCGGCGTGTAGAGGGAATTGTCTTTCAAGTACTGGAGTCTGTTATGCTTCTACTTCCTTGTCGGATGGATCAGGGCAGTGCGTGATCAGATCAGTAGATTTTGTTAGCAGTTATCACAATCCTTCACTGCCCAGCACTACTTATGTCAAGGTTTGTCCCCCGTTGGCACCGAATCCGCCACCCTCTTTGGGGGGGACTGTGACACAAAAGAGGTCCAGGGTGCCTGCTTGGGTTGTGGTTGTTGTTGTTTTGGGTACAATTTTGGGTTTGATTGCCTTGGAAGGTGGTTTGTGGGTGTGGTGTTGTAGGAACCGTGCGAGGTTTGGAGGGATGTCTGCTCATTATGCGCTTCTTGAGTATGCTTCTGGTGCGCCAGTGCAGTTCTCGTACAAGGAGCTGCAGCAAGCTACAAAGGGGTTCAAGGAGAAGCTTGGAGCTGGGGGATTTGGTGCTGTGTACAGAGGAACTCTTGTTAACAAAACTGTTGTTGCTGTGAAGCAACTTGAGGGCATTGGGCAAGGTGAGAAGCAGTTTAGGATGGAAGTTGCCACTATAAGTAGCACTCATCATCTCAATTTGGTGAGGCTTATTGGCTTTTGCTCTGAAGGGCGCCACCGGCTTCTGGTTTACGAGTTCATGAAAAATGGGTCTCTTGATGATTTTCTCTTCATGACAGAACAACATTCAGGAAAGTTGTTGAATTGGGAGTATCGATACAACATTGCCCTGGGCACTGCAAGAGGCATCACATACTTACATGAGGAGTGCCGTGACTGCATAGTCCATTGTGACATAAAACCTGAAAACATTCTCTTGGATGAGAACTATATAGCCAAAGTCTCTGATTTTGGTCTTGCAAAGCTCATTAATCCCAAGGACCACCGGCATCGGACCTTGACAAGCGTGAGAGGAACCAGAGGATATTTGGCCCCAGAATGGCTGGCGAATCTTCCCATAACATCCAAATCTGATGTTTATAGCTATGGCATGGTTTTGTTGGAGATTGTGAGTGGGAGAAGGAATTTTGATGTCTCAGAGGAAACAAATAGGAAGAAGTTCTCCATTTGGGCCTATGAAGAGTTTGAGAGAGGTAACATCAGTGGAATTTTGGACAAAAGACTAGCTGACCATGAAGTTGACATGGAGCAAGTGAAAAGAGCAATTGAAGCAAGCTTTTGGTGCATTCAAGAGCAGCCATCTCAAAGACCAACAATGAGCAGGGTGTTGCAAATGCTAGAAGGGGTAACAGAGATTGCAAAGCCACCTGCTCCAAAATCAGTGATGGAAGGAACTGTTAGTGGAACCAGCACACACCCGAGTAGCAATGCCAGTGCATTCTCCACAATTGCAGCTTCACCACCTGTTCCCTCCTCTACATCATCATTTCAAACTAGTGCTGTTTCAACCTTAACCTCAGGAAGGAACACTGAGAAGGCTACCTTATCCCTTTTACAATCAGACACGTGA 2520 0.4853 MFLKTHFLFLVLVLATTAVATAIDLGSTLSASSRNQTWSSTDASYSLGFVSVQPPTTPPSYTAAIVYSGGAPVVWSAGNGAAVDSGGSLQFLRNGALRLVNGSGATVWDSGTADLGATSATLEESGNLVISNGTGTLWSSFDHPTDTILPSQNFSVGKSLTSQSYSFGLSSIGNLTLNWNNSIVYWTQGLNSSVNVSLDSPVLGLTSIGILQLSDAKLSTPVVIAYSSDYAEGNSDVLRVLKLDNDGNLRIYSTNKGSASSSARWTAVLDQCEVYAYCGNYGVCSYNDSSPICGCPSENFEMVDPNDARKGCRRKASLDSCQGSATMLTLDHAVILSYPPEAASQSFFIGISACRGNCLSSTGVCYASTSLSDGSGQCVIRSVDFVSSYHNPSLPSTTYVKVCPPLAPNPPPSLGGTVTQKRSRVPAWVVVVVVLGTILGLIALEGGLWVWCCRNRARFGGMSAHYALLEYASGAPVQFSYKELQQATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIGQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDDFLFMTEQHSGKLLNWEYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYIAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFDVSEETNRKKFSIWAYEEFERGNISGILDKRLADHEVDMEQVKRAIEASFWCIQEQPSQRPTMSRVLQMLEGVTEIAKPPAPKSVMEGTVSGTSTHPSSNASAFSTIAASPPVPSSTSSFQTSAVSTLTSGRNTEKATLSLLQSDT 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00917 839 MobiDBLite consensus disorder prediction 773 839 - -
Cca08g00917 839 PANTHER OS07G0415500 PROTEIN 7 828 - -
Cca08g00917 839 CDD STKc_IRAK 495 765 - -
Cca08g00917 839 ProSiteProfiles Protein kinase domain profile. 489 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00917 839 PIRSF SRK 1 823 IPR024171 GO:0004674
Cca08g00917 839 ProSiteProfiles Bulb-type lectin domain profile. 29 143 IPR001480 -
Cca08g00917 839 SUPERFAMILY Protein kinase-like (PK-like) 472 764 IPR011009 -
Cca08g00917 839 SMART blect_4 29 144 IPR001480 -
Cca08g00917 839 ProSiteProfiles Bulb-type lectin domain profile. 145 264 IPR001480 -
Cca08g00917 839 Pfam Protein kinase domain 492 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00917 839 Gene3D Transferase(Phosphotransferase) domain 1 564 776 - -
Cca08g00917 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Cca08g00917 839 Gene3D Phosphorylase Kinase; domain 1 462 563 - -
Cca08g00917 839 Gene3D - 145 268 IPR036426 -
Cca08g00917 839 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Cca08g00917 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 190 IPR036426 -
Cca08g00917 839 CDD B_lectin 32 144 IPR001480 -
Cca08g00917 839 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 7 828 - -
Cca08g00917 839 SMART serkin_6 489 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00917 839 Gene3D - 19 143 IPR036426 -
Cca08g00917 839 Pfam D-mannose binding lectin 73 157 IPR001480 -
Cca08g00917 839 MobiDBLite consensus disorder prediction 780 839 - -
Cca08g00917 839 Pfam S-locus glycoprotein domain 230 296 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00917 Cca-Chr8 20889347 20892354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00917 462 773 Receptor kinase-like Gene Family AT5G20050 43.077 2.19e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Cca08g00917 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00917 - - gmx:100795819 1437.94