Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00909 ATGGAGGACACGATGAGCGTGGAGATAGGGTTTGTGGCGAAGGAGAGAGGGAAGTGCGACGTCTTCACGGTGTACGACGGCCACGACGGGGCTCAGGTGGCGGAGGCGTGTTGGGAGCGGTTGCACCGGCTGGTGGTGGAGGAGGTGGAGAGGAGTGGGGGTCATATGGAATTGGACTGGGAGGGAGTTATGCAAAGGGGCTGTGATGGGAAGAGGAGGCGAGGCCGTCTACTGATCATAAGGAAAACATTGGGGTTTTTATGGAATAAAATGGGAAGCTTCTTCCCGAAGAAGCCGTATGCTATGGTTTTGCTACCTAGATTTGTGGAGATTCGGTCTCTTCAAGCTCCTTATCCACTGATACAGACAGTTGTTCTTCAAAATGTTCGCCATCTTTCCCATAGCAATAATTCCGTGATACTTGCTTTGGATAATTTCATTCATGGCCTTTTTCCTGTGCCCCTTAGAGTCCAGATAGTCCAATTAACGGCTTCTGACAACTTTGAAGAGACCTTGTCATTGTGCAAGCTTCTTCCACCTGATGATTCAAGTCTCCGTGCTACAAAGGAGGGGTCAATTCATATAAGCTGGAAGACAAAGAAAAACAACAAGTGA 615 0.4878 MEDTMSVEIGFVAKERGKCDVFTVYDGHDGAQVAEACWERLHRLVVEEVERSGGHMELDWEGVMQRGCDGKRRRGRLLIIRKTLGFLWNKMGSFFPKKPYAMVLLPRFVEIRSLQAPYPLIQTVVLQNVRHLSHSNNSVILALDNFIHGLFPVPLRVQIVQLTASDNFEETLSLCKLLPPDDSSLRATKEGSIHISWKTKKNNK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00909 204 Gene3D - 1 82 IPR036457 -
Cca08g00909 204 SUPERFAMILY PP2C-like 1 65 IPR036457 -
Cca08g00909 204 PANTHER VACUOLAR SORTING PROTEIN 39 97 197 - -
Cca08g00909 204 PANTHER CNH DOMAIN CONTAINING 97 197 IPR032914 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00909 Cca-Chr8 20652572 20654770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00909 22 63 PP2C-type Phosphatase Gene Family AT1G17550 43.137 1.97e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00909 K20183 - ccaj:109805630 186.422