Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00886 ATGGACCCTCTCCTAATCGCActcctctctctcctccctctcctcctcttcctcctccaccGCTCCAAGGCCCAAGCCCCGAAAGAGGCCCCCACCATCCCCGGCGCGTGGCCCATCCTGGGCCACCTCCCCCTCCTGGCCCGCTCCCGCTCCACCCACCACCTCCTGGGCTCCCTCGCCGACGCCCACGGCCCACTCTTCACCATCAAGCTGGGCACCCAGAAAACCCTAGTCATCAGCAACTCCCAAATCGCCAAAGAATGCTTCACCACCAACGACGTCGCCGTCTCCAACCGCCCCCACCTCGTCGCCTGCCAGAACATGACCTACAACCTCGCCATGCTCGGCTTCGCCCCCTACAGCCCCTTCTGGCGCGACATGCGCCGCAACGTCGCCTCCGCCTTCCTCGCCGACCACCGCATCGACTCCCTCGCCCCCGTCCGCGTCAACGAGGTCCGAACCTCCGTCAAGGAGCTCTACCAAAAGTTTACTCGTATAAGCGACGGGAAGAATGAGTATGTGATGGTGGATATGAAGCAGTGGCTGAAGGAGTTGGCGTTGAACGTGGTGGggaggatggtggcggggaagaggtacttcggggagaaggcggtggtggaggagggggaggCGCAGCGGTGGCTGAAGGCGCTGAGGGAGTACATGAGGCTGATGGGGGCGTTCGCGGTGGGGGACGCGGTGCCGTGGCTGAGGTGGTTGGACTTGGGGGGGCTGGAGAAGGCCATGAAGGAGAATTTCAAGGAGCTGGACGCGGTGGTGGGGGAGTGGCTGGAGGAGCATCGGAGGGAGAGAGACTCGAGAGGTGACCGTGACGACGGAGATTTCATCGATGTGATGCTGTCCATGATCGACGGGACCACGCTTCATGGGTTTGATGCGGATACGGTAATCAAAGCCACCGCAATGGCAATGATTCTGGGAGGAACAGACACCAGCTCAGCCACACACATATGGACACTGTCTCTGCTACTGAACAACCCCAACACACTGAAAAAAGTGATGGAAGAAATGGACACCCACATCGGAAAAGAAAGGCTGGTAACCGAGTCAGACACAAACAAGTTGGTATACCTTCACGCCGTGGTGAAAGAATCCCTAAGGCTATTCCCACCCACTCCTCTCTCCGCACCTCGCGAGTTCCGCGAAGATTGCACCCTGGGAGGGTACCACGTGAAGAAGGGAACGCGTCTCATGACAAACCTGTGGAAGATCCAAACGGACCCTAGCGTTTGGGAAGAGCCCTTGGAGTTCAAGCCAGAGAGGTTCCTCACTACGCACAAAGATGTTGATGTTAAGGGTCGACACTTCGACCTCATACCCTTTGGGAGTGGAAGGAGGATTTGCCCTGGAATATCCTTTGGCCTTAGGACCACTTATTTGACTTTGGCTAACTTTCTTCACTCCTATGAAGTCGTCAAGAGTTCCAATGAGCCTATAGATATGACTGCATCGGTTGAAATAACCAATGTCAAGGTTACTCCACTTGAGGTTCTCATCAAACCTCGTTTGTCTCCTAGTCTTTATGAATCCATGTGA 1557 0.5273 MDPLLIALLSLLPLLLFLLHRSKAQAPKEAPTIPGAWPILGHLPLLARSRSTHHLLGSLADAHGPLFTIKLGTQKTLVISNSQIAKECFTTNDVAVSNRPHLVACQNMTYNLAMLGFAPYSPFWRDMRRNVASAFLADHRIDSLAPVRVNEVRTSVKELYQKFTRISDGKNEYVMVDMKQWLKELALNVVGRMVAGKRYFGEKAVVEEGEAQRWLKALREYMRLMGAFAVGDAVPWLRWLDLGGLEKAMKENFKELDAVVGEWLEEHRRERDSRGDRDDGDFIDVMLSMIDGTTLHGFDADTVIKATAMAMILGGTDTSSATHIWTLSLLLNNPNTLKKVMEEMDTHIGKERLVTESDTNKLVYLHAVVKESLRLFPPTPLSAPREFREDCTLGGYHVKKGTRLMTNLWKIQTDPSVWEEPLEFKPERFLTTHKDVDVKGRHFDLIPFGSGRRICPGISFGLRTTYLTLANFLHSYEVVKSSNEPIDMTASVEITNVKVTPLEVLIKPRLSPSLYESM 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00886 518 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 SUPERFAMILY Cytochrome P450 34 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 Gene3D Cytochrome P450 23 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 Pfam Cytochrome P450 31 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 517 - -
Cca08g00886 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Cca08g00886 518 PANTHER CYTOCHROME P450 82C3-RELATED 5 517 - -
Cca08g00886 518 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00886 518 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00886 Cca-Chr8 19973629 19981293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00886 1 515 Cytochrome P450 AT4G31940 46.300 6.21e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00886 - - gmx:100802193 789.645