Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00877 ATGTTCCCTCACCAACACCGCCAACTTCCTCCTCAACCGCACTTCCTCCTCTACCATCCGCAAAACGCAGCTTCTTGGCGTCGTTTTCGAGGACCTGATTCGCGTTTCCAATTCCAACTCCGTTTTGTTCCCTTACTTTCTCATCCTCTGCGCCTCGAGAAAATGTACATCGTTCTCCACAAGATCAAAACGCTAATTGAAGATTGCTCCAATGGAAGAAACAAGTTCAATCTGGTCGTGCAAATCGAAACCGTCGTTGACACCTTCCACAGGCTCACCGGAGAACTTTCCACGCTCCTCGATGTTTTCCCTCTCCAAGAACTCCACCTAAACGGCAACGTTCAGGAACTCGTTATCCTCTTGCGAAAACAGTGCTCTGAATCCATACCGTTTGTCGGAGCCGAACAGATTTCTTGTACATATAAAATAAAATGGTTCAGTGGTTTAACTAGTTGTGCTTAA 462 0.4654 MFPHQHRQLPPQPHFLLYHPQNAASWRRFRGPDSRFQFQLRFVPLLSHPLRLEKMYIVLHKIKTLIEDCSNGRNKFNLVVQIETVVDTFHRLTGELSTLLDVFPLQELHLNGNVQELVILLRKQCSESIPFVGAEQISCTYKIKWFSGLTSCA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00877 153 PANTHER U BOX DOMAIN-CONTAINING 48 137 - -
Cca08g00877 153 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 48 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00877 Cca-Chr8 19629189 19629736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00877 47 143 U-box Gene Family AT5G01830 43.299 4.82e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00877 - - ccaj:109792769 276.944