Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00866 ATGACTACGCCTAGTTCTCGTCGTTCTTTATATTCTTTGCTCTTTATTTCTTCCATTCTATTTACTTCATTTTCCCTTATCTCTCAGGCACAAGCCAAGCCCCTATTAGTGAATGGACTATCATATTCTTTCTATTCCAAAACCTGTCCCAATCTTGAAACCATTGTGAGAAACCATCTCAAGAAGGTGTTCACGCGAGCTAATTGGCAAGCTCCAGCCTTACTCGTCATTTTCTTCCATGATTGTTTTGTTCAGGGATGTGATGGGTCGTTGCTGCTGGATGGGAATCCAGGTGAAAGGGATAATCCACTGAACCGTGGAATAAGCCATAAAGCAGTGCAAACCATTGATGATATAAGGGAAGTTGTCCAAAAGGAGTGTGGAAGGGTCGTTTCTTGCGCAGATATCACTGTCTTGGCTGCTCGTGATGCTGTTTTCCTATCCGGAGGGCCCGATTATGGTGTGCCACTAGGAAGACGAGATAGTCTAAACTTTAGCTTTGAAGAAGCAAGCAATCTTCCATTACCCTACAACATCTCTAATGTGATACTTGAGACATTTGCTTCCAAAAACTTTGATGTCATAGATGTGGTTGCTTTATCAGGTGCACACACTATTGGTCGTGCACATTGTCACACATTCTACAATAGACTTTCTCCTCTAGACCCAAACATGGACAAAACCTTAGCCAAAATCCTCAACTCAACTTGCCCAAGTACATACTCACGTAACACTTTTCATTTGGACATTAGAACCCCTAAAGTGTTTGATAACAAATACTACATTAACTTAATGAACCACCAAGGTTTGTCCACCTCTGACCAAGACTTGTTCTTAGATAAGAGGACAAAGGGACTCGTAGAGGCTTTTGCACTCAATCAAACCTTATTCTTTGAGAAATTTGGGGATGGGTTTATAAGGATGAGCCAATTGGATGTGTTGACGGGAAATCAAGGTGAAATTCGTGCAAAATGCAATGTGATAAATGATAAGAAATCTATAGAGATGTCTATTTTGGATGAGACTGTACAGATACCCATCAATTAG 1047 0.4078 MTTPSSRRSLYSLLFISSILFTSFSLISQAQAKPLLVNGLSYSFYSKTCPNLETIVRNHLKKVFTRANWQAPALLVIFFHDCFVQGCDGSLLLDGNPGERDNPLNRGISHKAVQTIDDIREVVQKECGRVVSCADITVLAARDAVFLSGGPDYGVPLGRRDSLNFSFEEASNLPLPYNISNVILETFASKNFDVIDVVALSGAHTIGRAHCHTFYNRLSPLDPNMDKTLAKILNSTCPSTYSRNTFHLDIRTPKVFDNKYYINLMNHQGLSTSDQDLFLDKRTKGLVEAFALNQTLFFEKFGDGFIRMSQLDVLTGNQGEIRAKCNVINDKKSIEMSILDETVQIPIN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00866 348 Pfam Peroxidase 56 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 ProSiteProfiles Plant heme peroxidase family profile. 39 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 Gene3D Peroxidase, domain 2 174 308 - -
Cca08g00866 348 CDD secretory_peroxidase 39 328 IPR033905 GO:0004601|GO:0042744
Cca08g00866 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Cca08g00866 348 SUPERFAMILY Heme-dependent peroxidases 39 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g00866 348 PANTHER PEROXIDASE 15 333 - -
Cca08g00866 348 Gene3D - 44 329 - -
Cca08g00866 348 PANTHER PEROXIDASE 25-RELATED 15 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00866 Cca-Chr8 19393113 19400627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00866 1 348 Peroxidase AT1G71695 50.139 2.16e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00866 K00430 - gmx:100816373 542.347