Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00853 ATGGCAGCTTCAACAATGGGTCTGTCTTCACCATCACTGGCTGGCCAAGCAATCAAGCTGGCCCCCTCCACCCCAGAGCTAGGCAATGGAAGGGTCAGCATGAGGAAAACAGCCTCCAAAAGCGTTTCCTCAGGAAGCCCATGGTACGGCCCAGACCGTGTAAAGTACTTGGGCCCATTCTCGGGTGAGGCCCCATCGTACCTGACTGGTGAATTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACTTTTGCCAGAAACCGTGAACTGGAAGTGATCCACTCGAGATGGGCCATGTTGGGAGCCTTGGGCTGCGTCTTCCCTGAACTATTGGCCCGCAATGGTGTCAAGTTTGGCGAGGCCGTGTGGTTCAAGGCTGGGTCTCAGATATTCAGCGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCTTGATCCATGCACAGAGCATCCTTGCGATCTGGGCCACCCAGGTTATTTTGATGGGTGCTGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTTGGTGAGGTGACAGACCCAATCTACCCAGGTGGGAGCTTTGACCCATTGGGCCTTGCAGATGACCCAGAGGCCTTTGCTGAGTTGAAGGTGAAAGAGTTGAAGAATGGTAGGTTGGCCATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTCACTGGAAAGGGACCTTTGGAAAACCTTGCTGATCACTTAGCTGACCCAGTCAACAACAATGCCTGGGCCTATGCCACCAACTTCGTCCCCGGAAAGTGA 795 0.5409 MAASTMGLSSPSLAGQAIKLAPSTPELGNGRVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00853 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Cca08g00853 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 264 - -
Cca08g00853 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Cca08g00853 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Cca08g00853 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00853 Cca-Chr8 19007261 19008444 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00853 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 88.390 8.53e-173 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00853 K08912 - ccaj:109815895 539.65