Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00848 ATGTCCCTACCCATTTTCTTCTTCACTCTTCTACCTCTACTATTCCTGTTCCACTCTTCTCATTGCACCACCATTCTAGTTGATGGGTCTTCAGAGTGGAAGAACCCCACTGTTCACATTGGAGATTCCATCATTTTCAAGCACAAGCAACACTACAACATCTACATTTTCAAGAACCAGAAAGCCTTTGATCTCTGCAATTTCACGCAAGCCACTCTTCTCACCAACCCCAACACTGCCTCCTACACGTGGCATCCATCACGCCATGGTTTCTTCTACTTTAGCTTCAATGATGGGTCGTTTAAAGCATGTCAAGGTACTTCTCAGAAGCTAGCAATTAAGGTCACTTCACTAGTAGCAGCTACACCACATGCCTCAGCAATGCCACCAGAACTTTCAGCAGCTCCATTCTCTGGTCAAGTGCCATCATCTTCTCCTTTTTATCCTCTACAAGCAGGTTCACCTTCACCAAGTGTGACTGATCCATTGGCACCCTATAAAAGTGGCAGCTTGCCCTTCATTACCAGTAACCCTGCAGTTCCTCTTCCCACTGATGAAGTTGACTCTGCTGCTATACACCCTCTTCCCACCTCTAGTGCCCATCAAGGACAGGTGATGATTGGATCATTTGGACTTCTAATAGGTGTGCTCACCATTACTTTACTGCTACTATTAGATCCTATTGACACTACGGTCTACTCCAAGACCACATTTGATGGTGCCGGATACGAGGTTGATTACAAAAAGGAAGAGAAGCACCACAGGCATCTCGAGCATCTTGCTGAAATGGGAGCAGTTGCTGCTGGTGCCTGTGCTTTGCATGAGAAGCACAAGGCACATAAAGATCCAGAGCATGCCCATAGGCACAAGATAGAGGAGGAGATTGCAGCCACAGCCGCTGTTGGAGCTGGTGGATTTGCCTTCCATGAGCATCATGAGAAGAAAGAAGCAAAGAAACATCATCATTTCTTAGTTTCCGTGAGCCATAGATTTGAGGTAAAGGGTTTGTTGATTGTGGAGTCAGAAGAGCGGATTGTTGATGCGTTTGTGAAGGGCATTGTGCAGAAGAAGAAGATTGTCGTTGGCTGA 1089 0.4601 MSLPIFFFTLLPLLFLFHSSHCTTILVDGSSEWKNPTVHIGDSIIFKHKQHYNIYIFKNQKAFDLCNFTQATLLTNPNTASYTWHPSRHGFFYFSFNDGSFKACQGTSQKLAIKVTSLVAATPHASAMPPELSAAPFSGQVPSSSPFYPLQAGSPSPSVTDPLAPYKSGSLPFITSNPAVPLPTDEVDSAAIHPLPTSSAHQGQVMIGSFGLLIGVLTITLLLLLDPIDTTVYSKTTFDGAGYEVDYKKEEKHHRHLEHLAEMGAVAAGACALHEKHKAHKDPEHAHRHKIEEEIAATAAVGAGGFAFHEHHEKKEAKKHHHFLVSVSHRFEVKGLLIVESEERIVDAFVKGIVQKKKIVVG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00848 362 Gene3D - 21 118 IPR008972 -
Cca08g00848 362 PANTHER OS04G0422700 PROTEIN 4 225 - -
Cca08g00848 362 Pfam ABA/WDS induced protein 246 321 IPR003496 -
Cca08g00848 362 PANTHER OS04G0422700 PROTEIN 4 225 - -
Cca08g00848 362 SUPERFAMILY Cupredoxins 22 115 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00848 Cca-Chr8 18846286 18858776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00848 - - gmx:100527618 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00848 08 18846286 18858776 Cca08g00848 08 18846286 18858776 ECH
Cca08g00848 08 18846286 18858776 Cca02g02158 02 41903045 41910804 PCT