Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00811 ATGTCATCAAATCAGACACCCAAATTCGTCCTCCCAAACAACGACCCTGAGCAACAAGCATCAACAACCCTAGAGATTGAACCTGAGGACACCTTCGACTACTCCAAAAGATCTCAGTGGCTTCGTGCAGCTGTTTTGGGAGCCAATGATGGGTTGGTCTCAACAGCATCATTGATGATGGGTGTTGGAGCTGTGAAGCAGGACATCAAGGTGATGATCCTCTCAGGGTTTGCAGGGTTGGTGGCTGGTGCATGCAGCATGGCCATAGGGGAGTTTGTGTCTGTGTACTCTCAGTTGGACATAGAGGTTGCTCAAATGAagagagagaaggagagagggcaaggtagagagagagaaaagagtagtgaagagagagagagTTTGCCAAACCCTTTGCAAGCTGCAGCAGCATCAGCTTTGGCCTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCATCCTTCATAAGGGACTATAGGGTGAGGCTTGGAGTGGTTGTGTCTGCTGTAACTCTAGCTTTGGTGGTTTTTGGTTGGTTAGGGGCTGTGTTGGGAAAGGCTCCTGTGTTGAGGTCTGCTGTTAGGGTCTTGGTTGGAGGTTGGCTGGCCATGGCCGTCACTTTTGGCCTAACCAAGTTGATTGGCTCAAGCGGACTTTAG 660 0.4545 MSSNQTPKFVLPNNDPEQQASTTLEIEPEDTFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGQGREREKSSEERESLPNPLQAAAASALAFSVGAMVPLLAASFIRDYRVRLGVVVSAVTLALVVFGWLGAVLGKAPVLRSAVRVLVGGWLAMAVTFGLTKLIGSSGL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00811 219 MobiDBLite consensus disorder prediction 107 126 - -
Cca08g00811 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 216 IPR008217 GO:0005384|GO:0030026
Cca08g00811 219 MobiDBLite consensus disorder prediction 107 130 - -
Cca08g00811 219 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 18 216 - -
Cca08g00811 219 MobiDBLite consensus disorder prediction 1 22 - -
Cca08g00811 219 CDD Nodulin-21 39 188 - -
Cca08g00811 219 Pfam VIT family 121 211 IPR008217 GO:0005384|GO:0030026
Cca08g00811 219 Pfam VIT family 41 117 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00811 Cca-Chr8 16961284 16962407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00811 24 219 Nodulin-like Gene Family AT3G43660 73.980 4.40e-104 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00811 K22736 - gmx:100807991 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00811 08 16961284 16962407 Cca02g02173 02 42118062 42119352 PCT