Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00810 ATGGATGCGCAAGCCAAGAAAAAGGCTTTGTTTCGTGCTAAATTGAATGCTCAGAAGAAGGAAAAGCGCATAGAATCTCCCCTTGTGAGGTATAATGAATTTGATCAGCCTGTTTGCCGGGTTTGTGATGTTGTTCTAAAGTCTGAGTCTTTATGGGATGCACATCAAGTTTCTCGCAAGCATCGTGAGGCCATAAGTAATCTGAAAGCTAATGCAGCTGGATTAACTCAGCATAACAATGCAAAGCCTGTTTCTGATGCCAACATTCCCAAAGCTAAACCACAACATGCTTTGGAGTCACAATCCAAACTGCCAGAAGGTTCACGAGAGGCGTCTAAACCTCAATCATCATCAGTGCTTCCACCGGGGTTTTTTGATGACAAGGATTCAGGAAAGACAAAATCTGAACATTTAGAGGACTCTGATCTTGGTAGAAAAGCTGGGGTTTCTTCTAAAAGTCAGGTGTTAAACTTGGAGAAGGAAAAAGGTCATTTTGAGGGCAACAATGCTGCAGAGTTAAATGTTAGCCAAGCCAAAAAGGAGATTAGTCACACATCGGTCAAGACTACTGATACAGAAGTAAAAGGGATTCTGCCTGAAGGATTTTTTGACAATAAGGATGCTGATTTGCGAGCCCGTGGCATAAAGCCTGTTAAGCCAGATGTCAAAGACGAGTACAAGGAATTTGAGAAGTTGATTCAAGAAGACTTGCAGGAGGTGGACAACCGGTTGGAAGAAGAAGAGATTGACGCAGCCGAAATGATAGAAGAAGCTGAATCTGTAGAGCAAAAGTTCTTGAGGGAGAAAGTGGAAGTGTTGAAGAAGAGGAGATTGGAGCTTAAAGCTGCTAACACTGCAAAGCGTAGTAAATCATCTGAGGTTGAAGCCGAGGAGTCTAGACACCAAGAGTCATCCAGTGATGATGAAAGTGAAGAGAATTTTGCCGTGGACTGGAGAGCACAACACTTGTAA 972 0.429 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHREAISNLKANAAGLTQHNNAKPVSDANIPKAKPQHALESQSKLPEGSREASKPQSSSVLPPGFFDDKDSGKTKSEHLEDSDLGRKAGVSSKSQVLNLEKEKGHFEGNNAAELNVSQAKKEISHTSVKTTDTEVKGILPEGFFDNKDADLRARGIKPVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAESVEQKFLREKVEVLKKRRLELKAANTAKRSKSSEVEAEESRHQESSSDDESEENFAVDWRAQHL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00810 323 MobiDBLite consensus disorder prediction 127 146 - -
Cca08g00810 323 Pfam Zinc-finger of C2H2 type 39 61 - -
Cca08g00810 323 MobiDBLite consensus disorder prediction 101 119 - -
Cca08g00810 323 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Cca08g00810 323 PANTHER UNCHARACTERIZED 1 323 IPR040050 GO:0003676|GO:0005681|GO:0008270
Cca08g00810 323 Coils Coil 230 283 - -
Cca08g00810 323 MobiDBLite consensus disorder prediction 73 154 - -
Cca08g00810 323 Gene3D Classic Zinc Finger 32 70 - -
Cca08g00810 323 MobiDBLite consensus disorder prediction 283 323 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00810 1 323 C2H2 Transcription Factor Family AT3G02860 52.252 1.09e-93 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00810 K13104 - gmx:100808515 516.538