Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00807 ATGGATCAGAAGTTCATTGGAAACTCGTTGTCGGTGATGGACACAAAGCGAATGTTAAAGTGTGGGTCCCACCACCATCATTCTCACTCTGACAATTGCTTTCGCTTCATCACAAACATTCCCCCCTTCAACACTTCTAATCTTGTCAACTCTAACTTCCCTTTGTCACTCACATTTCTATCTTTGGACACTAATGACATCATTCCTATGGTTGTTGATTTGAACAAGTCTAAAAAGCAGAAGAGGTTCACAGGAATTCCCCATGCCAGACACCTTCGAAGCTTGTCCGTGGACTCTAACTTTTTCTACAATTTTGGGTTCACTAATGGTGAAAATGAGAGAATCATTGGGAAAAGTGGAAGTGAGCAAAGGGTGGAGCATCAACGACATAACTCAGTGGACAGACCCTCGACTAAGTTATTTAAGGTAGACTCAGGGATGGAGATGATGGATTATAAGAGGAAAGATCTGACCCTTGATAAACTCCCTAAACTAGCTCTTGTTGATCCAAAACAAGCTCGATCTAACAGGAAATCAACCATTCGATCAAAGTCGAGGAATATTCGTTATGCAACTATGTTGAAGAGGAAGATTCTTTACACAACTATGTTGAAGAGGAAGATTCGTCATGCAACTAAGTTAAAGAGGAAGATGCAATCTCTTAGGAACTTAAGAAACTATCCTCTCTTCCCAAATTACCATGCTTGA 708 0.4054 MDQKFIGNSLSVMDTKRMLKCGSHHHHSHSDNCFRFITNIPPFNTSNLVNSNFPLSLTFLSLDTNDIIPMVVDLNKSKKQKRFTGIPHARHLRSLSVDSNFFYNFGFTNGENERIIGKSGSEQRVEHQRHNSVDRPSTKLFKVDSGMEMMDYKRKDLTLDKLPKLALVDPKQARSNRKSTIRSKSRNIRYATMLKRKILYTTMLKRKIRHATKLKRKMQSLRNLRNYPLFPNYHA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00807 235 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 12 198 - -
Cca08g00807 235 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 12 198 - -
Cca08g00807 235 Coils Coil 204 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00807 Cca-Chr8 16875910 16877984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00807 78 198 bZIP Transcription Factor Family AT1G43700 38.346 2.54e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00807 K20557 - gmx:778142 149.058