Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00804 ATGGCTCCGGAGAAACTCGCTGAGCTTGCTCTTATTGATCCTAAGAGAGCTAAAAGGATTCTTGCTAACAGGCAATCTGCTGCTAGATCTAAGGAGAGGAAGATTCGTTACACAAGTGAGTTGGAGAGGAAGGTGCAGACGCTTCAGACCGAAGCAACTAACCTTTCTGCACAGCTTACCATGCTTCAGAGAGACACTACAGATTTGACAGCCGAGAATAAGGAGCTCAAACTGCGTTTAGAGGCTTTGGAGCAGGAAGCGCAGCTTAGAGAAGATCTCAATGAGGCATTGAAGGAAGAACTGCAACGCCTTAGGGCACAAAGTAGTCGTTTGGGTGCTATTGCTGGTAACCCTTCTTTTGGTGGGTTATTCAACCAGTTGGCTTCCCAGCTAGCCATGCAACAGTTGACTAATTCTGCACCTCAGCAGTCACAACACCAGCCACAGGTTGGCATGCCTCCTCCTCCCTCTGGACAGAATCACCCTAACTTCATGGACTTCAATCAGCATAATAACAGCAGTAAATGA 528 0.4754 MAPEKLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATNLSAQLTMLQRDTTDLTAENKELKLRLEALEQEAQLREDLNEALKEELQRLRAQSSRLGAIAGNPSFGGLFNQLASQLAMQQLTNSAPQQSQHQPQVGMPPPPSGQNHPNFMDFNQHNNSSK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00804 175 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 168 - -
Cca08g00804 175 MobiDBLite consensus disorder prediction 161 175 - -
Cca08g00804 175 Gene3D - 14 67 - -
Cca08g00804 175 Coils Coil 38 114 - -
Cca08g00804 175 Pfam bZIP transcription factor 15 73 IPR004827 GO:0003700|GO:0006355
Cca08g00804 175 MobiDBLite consensus disorder prediction 135 175 - -
Cca08g00804 175 CDD bZIP_plant_RF2 16 65 IPR044759 GO:0003700|GO:0006355
Cca08g00804 175 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 168 - -
Cca08g00804 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 13 76 IPR004827 GO:0003700|GO:0006355
Cca08g00804 175 SUPERFAMILY Leucine zipper domain 15 67 IPR046347 GO:0003700|GO:0006355
Cca08g00804 175 SMART brlzneu 11 75 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00804 Cca-Chr8 16846424 16850891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00804 1 169 bZIP Transcription Factor Family AT1G43700 56.140 6.24e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca08g00804 bZIP_1 2.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00804 K20557 - gmx:778142 290.426