Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00802 ATGGACACAAAGAAAATGTTAAAGTGCGGGTCCCACCACCATCGTTCTCACTCCGACAATTGTTTTCGCTTCATCACAAACATTCCCCCCTTCAACACTTCTAATCTTGTCAACTCCAACTTCCCTTTGTCACTCTCATTTCCATCTTTGGACACTAATGACATCATTCCTATGGTTATTGATTTGAACAAGTCTAATAAGCGGAAGAGGTTCACAGGAATTCCCCATGCCAAGCACCTTCGAAGCTTGTCGGTGGACTCTAACTTTTTCTACAATTTTGGGTTCACTAATGGTGAAAATGAGAGAATCATTGGGAAAAGTGGCAGTGAGCAAAGGATGGAGCACCAACGACATAACTCAACGGGTGAACCCTCGACTAAGTTGTTTAAGGTAGACTCAGGAATGGAGATGATGGATTGTAAGAGGAAAGATCTGATCCTTGACAAACTCCCTGAATTAGCTCTTGTTGATCCAAAGAAAGCTAGATCTAACAGAGAGAATATGCAAATTTGTTTGTCGAGCACCAATTGTATTCAGAAGCTTTGGACCAACAAGATCAACTTAATGAAGAACTCATGA 579 0.4128 MDTKKMLKCGSHHHRSHSDNCFRFITNIPPFNTSNLVNSNFPLSLSFPSLDTNDIIPMVIDLNKSNKRKRFTGIPHAKHLRSLSVDSNFFYNFGFTNGENERIIGKSGSEQRMEHQRHNSTGEPSTKLFKVDSGMEMMDCKRKDLILDKLPELALVDPKKARSNRENMQICLSSTNCIQKLWTNKINLMKNS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00802 192 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 4 162 - -
Cca08g00802 192 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 4 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00802 Cca-Chr8 16822416 16825375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00802 77 174 bZIP Transcription Factor Family AT1G43700 36.449 3.11e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00802 K20557 - gmx:778142 117.472