Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00801 ATGGAGCTTATCAATGTGCTGCTTTCATTGATCCTTTGCTTATTAGTGTTATCAGTTCTCTTTTTGATGTATCTTACTCGTTCTCCTAAAGCAATGGAAGGCATCCCTGGCAACCTTGGTTGGCCTATTGTGGGAGAGAGTTTCTCATTTCTCTCTGACTTTTCAAGTCCTTCTGGGATCTTTAGCTTTATGAACAAGAGGCAAAAGAGATATGGAAAGATTTTCAAGAGCTTTGTGCTGGGGAGGTTCACAGTCTTCATGACTGGAAGAGAAGCAAGTAAGATATTGTTAACGGGCAAGGATGGGATTGTGAGTTTGAATCTGTTTTACACTGGCCAACAAGTTCTTGGCCCCACCAGCTTGCTGCAAACCACCGGAGAGGCACACAAAAGGCTAAGAAGACTGATAGCTGAACCTTTATCAATTGATGGCCTCAAAAAATATTTCCATTTCATCAATACTCAGGCAATGGAAACATTAGATCAATGGCAAGGAAGGAAAGTCCTGGTTCTTGAGGAGGCTTCTACATTTACTCTAAAAGTGATTGGACATATGATCATGAGTTTAGAGCCTTATGGGGAGGAACAAGAAAAGTTTAGGTCAAATTTTAAGATCATTTCTTCCTCATTTGCCTCATTGCCTTTTAAACTTCCAGGAACAGCTTTTCATCGTGGTATCAAGGCTCGGGATAGTATGTATGAGATGTTGGATTCTATAATTTCGCGGCGGAGAAGTGGCCAAGACTTTCAACAGGATTTCTTAGGATCCTTAGTTATGAAACACAGCAGAGAAGATGGAGGACAAGATGAAAATAGACTCACTGATAAACAACTGAAGGATAATATATTGACTTTGTTGGTTGCTGGCCATGATACCACAACTGCTGCTCTTACATGGCTTATCAAATTTCTTGATGAAAATCCATCTGTTCTGGAACAATTGAGAGAGGAACATAGACAAATTGTTGCAAACAGAAAGAGTGGAACAGATCTTACATGGTCCGAAGTTAATAATATGCCTTACACAACCAAAGTGATTAGTGAAACTCTCCGGAGAGCCACAATACTACCTTGGTTTTCAAGAAAGGCATCCCAGGATTTTGAAATTGATGGTTGTAAAATTCAGAAAGGTTGGTCTATCAACCTAGATGTTGTTTCTATACATCATGACCCAGAAGTTTTCCCAGATCCTGAAAAGTTTGATCCCTCTAGATTTGATGGACCCTTGAGGCCTTTCAGCTTTCTTGGATTTGGTAGTGGACCACGTATGTGTCCTGGAATGAACCTTGCCAAGATTGAAATCTGTGTCTTCATCCATCACCTTGTTAACAGATACAAGTGGAGAACTCTGGAGAAAGAAAATTCTGTCCAACCAACGCTTGTAAGGATGCCAAAGAATAAGTATCCTATTATAGTTGAGGCACTATAA 1428 0.4013 MELINVLLSLILCLLVLSVLFLMYLTRSPKAMEGIPGNLGWPIVGESFSFLSDFSSPSGIFSFMNKRQKRYGKIFKSFVLGRFTVFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQTTGEAHKRLRRLIAEPLSIDGLKKYFHFINTQAMETLDQWQGRKVLVLEEASTFTLKVIGHMIMSLEPYGEEQEKFRSNFKIISSSFASLPFKLPGTAFHRGIKARDSMYEMLDSIISRRRSGQDFQQDFLGSLVMKHSREDGGQDENRLTDKQLKDNILTLLVAGHDTTTAALTWLIKFLDENPSVLEQLREEHRQIVANRKSGTDLTWSEVNNMPYTTKVISETLRRATILPWFSRKASQDFEIDGCKIQKGWSINLDVVSIHHDPEVFPDPEKFDPSRFDGPLRPFSFLGFGSGPRMCPGMNLAKIEICVFIHHLVNRYKWRTLEKENSVQPTLVRMPKNKYPIIVEAL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00801 475 Pfam Cytochrome P450 36 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Cca08g00801 475 SUPERFAMILY Cytochrome P450 30 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 Gene3D Cytochrome P450 26 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PANTHER CYTOCHROME P450 FAMILY 722 SUBFAMILY A POLYPEPTIDE 1 11 436 - -
Cca08g00801 475 PANTHER CYTOCHROME P450 26 11 436 - -
Cca08g00801 475 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00801 475 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00801 Cca-Chr8 16800709 16803992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00801 1 455 Cytochrome P450 AT5G45340 36.009 2.02e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00801 - - gmx:100810666 862.448