Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00783 ATGAAACAAGAGGAACTTTCAAGGACTAAAGTTCTTCGTAAGTGTCAGTTGCAAGAAGCAGTCCAGGATAAAGAAGGTGGCTTAGATTCCTCAGTTGTTGAAGAAGGATCAAACTGGAGCATTGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCTCTTTTGCGGAGAAGTAAGATATTGGTGCTGGATGAAGCTACTGCATCAATTGATAATGCAACCGATTTGATTCTGCAGAAAACCATTAAGACTGAGTTTGCAAATTGCACAGTAATCACCGTGGCCCACAGGATACCAACCGTGATGGATTGCACTATGGTTCTTGCCATCAGTGACGGAAAGCTGGCAGAGTATGATGAGCCAATGACCTTGATGAAGAATGAAAAATCATTGTTTGGGCAGCTTGTCAAGGAATACTGGTCTCATTTTCAGTTTGCAGAATCACATTGA 447 0.4251 MKQEELSRTKVLRKCQLQEAVQDKEGGLDSSVVEEGSNWSIGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQKTIKTEFANCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMTLMKNEKSLFGQLVKEYWSHFQFAESH 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00783 148 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 11 148 - -
Cca08g00783 148 Gene3D - 1 137 IPR027417 -
Cca08g00783 148 Pfam ABC transporter 25 67 IPR003439 GO:0005524
Cca08g00783 148 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 11 148 - -
Cca08g00783 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 133 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00783 Cca-Chr8 15475806 15476811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00783 27 143 Calmodulin-binding Proteins AT2G36910 31.933 2.40e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00783 K05666 - fve:101300583 244.973