Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00775 ATGGTCCCACTTGTGTCGATACTCGTGGTTCTTGCTCTTCCTGTATTGGTGTTGATCCTCTTGAACAAACACAGAAGCCCTAAGAACCGTCGTCCACCGGGTCCAAGAGGCCTTCCCATAGTTGGCAACCTTCTCCAACTTGACAATTCAAATCTCAATTTCGAACTGTTGCAGCTCTCACAGACCCACGGCCCTCTTTTCTCTCTCAAACTTGGGTTCCAGCGGGCCATTGTTATTTCCTCTCCCAAACTCGCCAAAGAGCTCCTCAAAGACCACGATCTTAACGTGTGCACAAGGCCCCCCTCGCATGGCCCTCTGAAACTCTCTTACAATGGCTTGGAGCTCATTTTCTCTCCCTACAGTGACCACTGGAGAGAAATCAGAAAAATCTGCATGGTTCATTTCTTCAGCTCCAAACACATCTCTAGCTTCTCCCACGTCAGAAAATCCGAGGTGAAGCAAATGATTGAGATCATATCCCGCCACGCGTGTTCCTCGAAATCGACGAACCTGAGTGAGGTTATCTTGTCGGTTGCAAGTGCTATCATATGCAGGGTCGCCTTCGGGAGGAAGTACGATGAGGAAGGTGCTGAACGAAGCAGGTTCCACAACCTGCTTAATGAGACGCAGGCTATGTTCCTTTCCTTTTTTGTTTCGGATTTTGTTCCGTTCCTCGGGTGGGTTGATAAACTCACCGGCATGCATGCTCGTCTTGAAAATACTTTCAAGGCGTTGGATGTGTTCTTCCAAGAAGTCATTGACGACCACCTCGATCCTAATACGGTGAAACAAAGTGAAGAGATGAATATGGATATTGTTGAAGTGTTGCTCCAGCTAAAGAAGCAGGATCGCATGTCAATAGACCTCTCCTATGATCAAATCAAAGCTATCATCTTGGACATATTTGTAGCAGGTACGGATACAACTGCATCCACACCCGTGTGGGCAATGACAGGATTAATGAAGAACCCAAGAGTAATGGCCAAAGCTCAAGAAGAACTTAGAAATGTGTGTGGCAACAAAGAGTTCATAGAGGAAGAGGATGTTGAAAAGCTTGTATATCTGAAAGCAGTGCTAAAAGAGACACTGAGGTTTTATGCACCAACTCCACTTTTACCAAGAGAAGCCATTAGAAATTTCACAATAGAAGGGTATGAAATAGAAGCCAAGACATTAGTGTATGTGAATGGTTGGGCCATTCAGAGAGACCCTGAAGCTTGGAAAGACCCAGAAGAATTTTATCCAGAGAGATTCTTAAACAATGAGATAGATTTTAAGGGACAAGATTTTGAGATGATTCCGTTTGGTGCAGGGCGTAGAATTTGCCCAGGCATCTCGCTGGGAATGGCCACAGTGGAGCTCATAACTGCAAATCTTCTTAATTCATTCCATTGGGAAATGCCTGTGGGGATGAAACCTGAACACATAGACACTGAGGGGCTGCCAGGACTTGCACGACACAAGAAGAATCATCTTTGCCTTGTTGCCAAGAAACGTGTGTGA 1503 0.4558 MVPLVSILVVLALPVLVLILLNKHRSPKNRRPPGPRGLPIVGNLLQLDNSNLNFELLQLSQTHGPLFSLKLGFQRAIVISSPKLAKELLKDHDLNVCTRPPSHGPLKLSYNGLELIFSPYSDHWREIRKICMVHFFSSKHISSFSHVRKSEVKQMIEIISRHACSSKSTNLSEVILSVASAIICRVAFGRKYDEEGAERSRFHNLLNETQAMFLSFFVSDFVPFLGWVDKLTGMHARLENTFKALDVFFQEVIDDHLDPNTVKQSEEMNMDIVEVLLQLKKQDRMSIDLSYDQIKAIILDIFVAGTDTTASTPVWAMTGLMKNPRVMAKAQEELRNVCGNKEFIEEEDVEKLVYLKAVLKETLRFYAPTPLLPREAIRNFTIEGYEIEAKTLVYVNGWAIQRDPEAWKDPEEFYPERFLNNEIDFKGQDFEMIPFGAGRRICPGISLGMATVELITANLLNSFHWEMPVGMKPEHIDTEGLPGLARHKKNHLCLVAKKRV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00775 500 Pfam Cytochrome P450 32 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 SUPERFAMILY Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 Coils Coil 327 347 - -
Cca08g00775 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Cca08g00775 500 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 499 - -
Cca08g00775 500 PANTHER CYTOCHROME P450 71B11-RELATED 6 499 - -
Cca08g00775 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00775 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00775 Cca-Chr8 15285776 15288193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00775 7 500 Cytochrome P450 AT4G31500 47.094 4.79e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00775 - - gmx:100806470 783.097