Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00771 ATGCTCGGATCGGTTGGGTTGTTGATTCCTAGTTCAACCGATTGGTCCAGGGAGTACTTTTTGAATCGGACTGCAGGTGCCATTGGGGGCATTGCTGCTTCACTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACTGGGCAGTTCACTTCTGCTTCTGGGGCTGTTCGCTTTATTGCTTCTAAGGAAGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTGTTGCGGGATTTGCCCTTTGATGCTATTCAGTTTTGCATCTACGAGCAGATTCGAATAGGTTATATGCTTGCGgcaggtctattgggtagacttgccccaggcacaaaatcaatttga 354 0.3983 MLGSVGLLIPSSTDWSREYFLNRTAGAIGGIAASLIRVPTEVIKQRMQTGQFTSASGAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAAGLLGRLAPGTKSI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00771 117 Pfam Mitochondrial carrier protein 20 98 IPR018108 -
Cca08g00771 117 SUPERFAMILY Mitochondrial carrier 14 97 IPR023395 -
Cca08g00771 117 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 99 IPR018108 -
Cca08g00771 117 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 24 104 - -
Cca08g00771 117 Gene3D Mitochondrial carrier domain 9 111 IPR023395 -
Cca08g00771 117 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 24 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00771 Cca-Chr8 15165360 15167550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00771 22 99 Chloroplast and Mitochondria Gene Families AT2G30160 32.143 2.32e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00771 K15111 - gmx:100811130 144.821