Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00745 ATGTCCATGCAAGGGAACCATACAGATTATGTTACATCATGCACGTACTTGCCCCCACGAGTGAATTCAGATAAACCATGGTGCAACACAAAAGGGAAACTTCCAGAAAAAGCTTTGCCATTGTTGCAGATGCAAATATGTTTTATCTTTCTTGCAACTTTTTTCCTCCACACCTTTTTGGGTCGTCTAGGATTCCCCAGATTCACTTCCATGAGCATTGTTGGCTTAATCTTTGCAACTTCCTTCACTGAAAAATGGGCTGAGAGGTGTAAAGAATTGTTCTTTCATGATTCACAGGCTAATCTGGGATTAATTTCAGTATTTGGTTACATGCTTTTCCTGTTCTACACTGGGGTCAAAACAGACATGAGTGTGGTGCACAGGACTAGAAGGATTGCCACCAACATTGGCTCTATTTCCATAATGGCTCCCTTTCTATGTGGCGTAGCTGTTGTGCATTTTCACTCCTCAAGATTCCTAGACGTTGGTGATGCAGCAAAACTTGGAGTTATATGTGGTTTGTTCTCTGTGACCCCTTTCCCTAACATATGCTTGGTTTTAAGTGAGCTCAAGATCCTGAATTCAGAGTTAGGAAGATTAGGCCAATCCTCAGCTTTGGTCGCTGAGTTGTTCAATTTATTATTGGTAACGTTGCTTACTTTCTCTAGAATTATATTAGAAGATAAATCAAATGCTTGGATGCGTCTTTTAGGTGCAATGTTGTTTGTATTATTGGTTGTATTCGTCATTCGCCCTGCCATGTTTTGGATCATAAAACAAACCCCAGAGGGTTCCCCAGTATGCGATCACTATGTGTATTTCATACTCATCATGACTATGTTAGCATCCTATGCCACACATCGTATGGGGTTTTTTGCTCTCTTTGGACCTTTTGTATTAGGGTTGGCTACCCCAGAAGGGCCTCCACTAGGCACTGCCATCGTTAAGAAGATTGATACTATTGTTAATGAGGTTTTAATGCCTATTTTCGTTACCACGTGTGCGATGAGGGTGGACCTCAATGACTTCTTGAATTGGAGAAACAAAGAGGATGGAGGAATAGACTACCTCATGGTACAAACCTTTGTTGTTATCGTAGTAACCACTGTTGTCAAAATTGCTGCATGCATAGTACCTCCTTTGCGCAACAACATGCCCTTGACTGACGCTGTGTCTCTCTCTTTGATCTTGAATTGCAAAGGCATAGTCGAAATGGCCGGATACTCTCTGGTTAGAGATGTCATGGGCGTACCAGATAACGTGTTCGCATTGGTGATGACAAGCGTTATATTCAACGCCACAGTGATGCCAATGCTGGTGAGTTACCTCTACGACCCCATGAAGAAATACGCGGCAAACTACACAAAGCGAAACATCTTCGACCTAAGACGCAACGCGGAGCTTCGAGTTCTGACATGCATTCACAGGCCGGACAACATTCCCTCCACAATAAACCTTCTAGAAGCCTCGTACCCGACGAAGGACGAACCCTTATGCGCCTACGTGCTCCAACTCATAGAACTCATAGGCCGAGCCTCCCCCGTCTTCATCTGCCACCAGCTTCACAAGAGCTCCAACAACTCCATGGCCGAGAAACTCGTCGACGCGTTCCAGAACTTCGAGCAAGAGTTCAAGGACGCGTTGGTGGTGAACACGTTCACGACGATATCACCCGCTGAGATGATGTACGACGACATTTGCACGCTAGCGTTGAACAAGTTCACGTCGCTCATAGTTTTGCCGTTTCACAAAAAGTGGTCTTCGGATGGGAGCAGCGTGGAGATAGAGGACGAGTCGCTGCGCGAGTTGAACTACCGAGTCATGGAGAGAGCGCCGTGTTCGGTTGGAATCTTAATCGAGAGAGCGCAAATGACGCATATTTTCTCGCCTGAGACGCCTTACATGGTTTGTTTGCTTTTCGTTGAAGGGAAAGATGATAGAGAAGCGCTTTACTTTGCAAAGAGAATGATGAAGAACCCGCACGTGAGGCTCACCGTGGTGAGGTTTCTGGCCTCCACGAAGGAGGAAAACCCTAAGGTGAAGGATTGGCAGGAAATGCTTGACACGAAGATTTTGAATGATATGAAGAGTGAGAAGGTGGGGGAGGCTTGTGTGGAGTACATTGAGAAGAGGGTGAAGGATGGGCCTGAAACTGCTTTGGTGATTCGTTCTTTGGCATCTGAGTTTGATTTGATAATTGTTGGGAGACAAGCTGGGATTGAGACTCCTCAAACGAGTGGGTTGTTGCAGTGGAGTGAGTATCCGGAACTTGGGGTGCTAGGGGACTTGCTGGCTTCAACTGATGCTGCAGGAAAAGCTTCTGTGTTTGTGATGCAACAGCAAAGAACAGCTAGGGATGCTTGA 2364 0.4564 MSMQGNHTDYVTSCTYLPPRVNSDKPWCNTKGKLPEKALPLLQMQICFIFLATFFLHTFLGRLGFPRFTSMSIVGLIFATSFTEKWAERCKELFFHDSQANLGLISVFGYMLFLFYTGVKTDMSVVHRTRRIATNIGSISIMAPFLCGVAVVHFHSSRFLDVGDAAKLGVICGLFSVTPFPNICLVLSELKILNSELGRLGQSSALVAELFNLLLVTLLTFSRIILEDKSNAWMRLLGAMLFVLLVVFVIRPAMFWIIKQTPEGSPVCDHYVYFILIMTMLASYATHRMGFFALFGPFVLGLATPEGPPLGTAIVKKIDTIVNEVLMPIFVTTCAMRVDLNDFLNWRNKEDGGIDYLMVQTFVVIVVTTVVKIAACIVPPLRNNMPLTDAVSLSLILNCKGIVEMAGYSLVRDVMGVPDNVFALVMTSVIFNATVMPMLVSYLYDPMKKYAANYTKRNIFDLRRNAELRVLTCIHRPDNIPSTINLLEASYPTKDEPLCAYVLQLIELIGRASPVFICHQLHKSSNNSMAEKLVDAFQNFEQEFKDALVVNTFTTISPAEMMYDDICTLALNKFTSLIVLPFHKKWSSDGSSVEIEDESLRELNYRVMERAPCSVGILIERAQMTHIFSPETPYMVCLLFVEGKDDREALYFAKRMMKNPHVRLTVVRFLASTKEENPKVKDWQEMLDTKILNDMKSEKVGEACVEYIEKRVKDGPETALVIRSLASEFDLIIVGRQAGIETPQTSGLLQWSEYPELGVLGDLLASTDAAGKASVFVMQQQRTARDA 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00745 787 PANTHER CATION/H(+) ANTIPORTER 4 10 784 - -
Cca08g00745 787 Pfam Sodium/hydrogen exchanger family 47 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca08g00745 787 Gene3D - 452 752 - -
Cca08g00745 787 PANTHER CATION/H + ANTIPORTER 10 784 - -
Cca08g00745 787 Gene3D - 41 451 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00745 Cca-Chr8 14151571 14155569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00745 14 778 Antiporter Super Family AT3G44900 36.836 1.37e-165 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00745 - - gmx:100785558 1209.13