Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00696 ATGCTCATGGTCATATTCCGAGTTCTTACTCCGGATCAAGCCTATGAAGCGATCGATCTTCCCATTCTCAGCCTTCTTTTCGGCACAATGGTTGTCAGTGTCTACCTTGAAAGAGCGGACATGTTCAAATACATTGGAAAATTACTCTCTTGGAAGAGAAAAGGAACCAAAGACTTGCTTTGCAGAATCTGTCTCATTTCTGCTGTCTCAAGTGCACTATTCACTAATGACACTGCCTTAGATGGCTTCAATAAAACTGGGATTCCTGGTGCTCTTTGGGATGTCATGGAGCCTTATTCTAGAGTAAATAGTGCTAGTGGAATAGCAATACTTGCTCTAGTTATACTCATCCTATCAAATGTTGCTTCAAATGTACCAACTGTTCTATTGCTTGGAGGACCAGTTGCAGCCTCAGCTGCTGCAATTTCCCCAGATTATGAGAAGAAAGCATGGCTCATATTGGCTTGGGCCAGCACAGTTGCAGGGAACCTCTCACTGTTGGGATCAGCTGCTAACTTGATAGTGTGTGAACAAGCTCGCCGTGCCCCTAACATTGCATACACACTAACCTTCTGGAACCATCTCAAATTTGGTCTTCCATCAACTCTTGTAATCACTGCTATTGGTTTGACACTCATAAGATGA 645 0.4341 MLMVIFRVLTPDQAYEAIDLPILSLLFGTMVVSVYLERADMFKYIGKLLSWKRKGTKDLLCRICLISAVSSALFTNDTALDGFNKTGIPGALWDVMEPYSRVNSASGIAILALVILILSNVASNVPTVLLLGGPVAASAAAISPDYEKKAWLILAWASTVAGNLSLLGSAANLIVCEQARRAPNIAYTLTFWNHLKFGLPSTLVITAIGLTLIR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00696 214 PANTHER TRANSPORTER ARSB-RELATED 1 79 - -
Cca08g00696 214 PANTHER TRANSPORTER ARSB-RELATED 80 214 - -
Cca08g00696 214 PANTHER TRANSPORTER ARSB-RELATED 1 79 - -
Cca08g00696 214 Pfam Citrate transporter 2 79 IPR004680 GO:0016021|GO:0055085
Cca08g00696 214 PANTHER TRANSPORTER ARSB-RELATED 80 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00696 Cca-Chr8 13045976 13048010 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00696 - - ccaj:109806709 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02230 02 42832786 42839258 Cca08g00696 08 13045976 13048010 ECH
Cca08g00696 08 13045976 13048010 Cca08g00696 08 13045976 13048010 ECH