Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00695 ATGGCACTAGCTCCTACTTCAAAAGTTGTACTTGGTTCAATAGCCTTTGCAATCTTCTGGGTACTAGCAGTTTTCCCAGCAGTGCCTTTTCTCCCCATTGGGAGAACTGCAGGGTCTTTGCTTGGTGCAATGCTTATGGTCATATTCAAAGTTGTTAGTCCAGATCAAGCTTACAATGCAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGCACAATGGTTGTCACTGTTTTTCTTGAAAGAGCAAACATGTTCAAGTACTTGGGGAAATTGCTCTCTTGGAAAAGCAGAGGACCAAAGGACTTACTTTGTAGAATTTGTCTCATTTCTGCTCTCTCAAGTGCTTTTTTCACCAATGACACCTCTTGCATTGTGTTGACTGAATTTGTGTTGAAAATTGCAAGGCAACATAACCTCCCACCCTACCCTTTCCTTCTAGCGCTTGCCTCAAGTGCTAATATTGGATCCTCAGCAACTCCTATTGGGAACCCCCAAAATCTTGTCATAGCAATTCAAGGTAAAATATCATTTGGGAGGTTTCTAAAAGGTATTCTCCCAGCCATGCTTGTTGGGGTTGTAGTGAATGTTCTAATGCTCATAGCCATGTATTGGAAGGCACTAACTATTCATAAGGATGAGGAGGATCCAATTTCAGAAGTTGTAGCAGAAGAGGAGGTTATTTCCCACCAGTTTTCTCCACCCACAATGTCTCACTTCACATCCTTTAATTCTCAAGAATGCAATGGAAGTTTAGAACCTATTCAAAACTCTTCTCAAGTTCATGTTATGAGAGACCAATCAACTCCAAATGTAAGTGAAGTTCAGATGGTTTTTAGTAGCACAAAGGATTCCACAACAAACTCCAAGGAGGGGACAAATGACGCAAAACAGGAAACTAATCATTCAAAAGGTGTTGCTGTAGCAGTAGATAAAGCTATAGAAGCAAGTGTTGTGCTCTCTTCAGAAGGAAAGGACTATATAAAAGTAAAATGGAAGAGGGTACTATGGAAGTCTAGTGTTTATGCAATCACATTGGTGATGTTGATTGCAATGCTTCTTGGTTTGAATATGGCATGGACTGCAATTGCAGCTGCAATAACTTTGTTGGTTCTTGATTTCAAAGATGCAGGAGCAAGCTTAGACAAGGTATCCTATGCACTTTTGATATTCTTTTGTGGAATGTTCATCACAGTGGATGGCTTCAAGAAAACAGGAATTCCAAGTGCTATGTGGGATTTAATGGAGCCCTATTCTCGAATAAATCATGCTAGTGGAACAGCTATACTTGCTGTCGTTATACTTGTCCTATCAAATTTGGCTTCAAATGTACCAACTGTTCTATTGCTTGGAGCAAGAGTTGCAGCCTCAGCTGCTGCAATTTCCAAAGAAGATGAGAAGAAGGCATGGCTAATCCTAGCTTGGGTTAGCACTATTGCTGGCAACTTTTCACTATTAGGATCAGCTGCAAACTTGATAGTGTGTGAACAAGCTCGTCGAGCTCCAAATCATGGATACACATTAACCTTTTGGACCCATCTCAAATTTGGCCTTCCCTCCACTCTTATAGTAACTGCTATCGGGTTGACGCTCATAAAATGA 1599 0.4071 MALAPTSKVVLGSIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFKVVSPDQAYNAIDLPILGLLFGTMVVTVFLERANMFKYLGKLLSWKSRGPKDLLCRICLISALSSAFFTNDTSCIVLTEFVLKIARQHNLPPYPFLLALASSANIGSSATPIGNPQNLVIAIQGKISFGRFLKGILPAMLVGVVVNVLMLIAMYWKALTIHKDEEDPISEVVAEEEVISHQFSPPTMSHFTSFNSQECNGSLEPIQNSSQVHVMRDQSTPNVSEVQMVFSSTKDSTTNSKEGTNDAKQETNHSKGVAVAVDKAIEASVVLSSEGKDYIKVKWKRVLWKSSVYAITLVMLIAMLLGLNMAWTAIAAAITLLVLDFKDAGASLDKVSYALLIFFCGMFITVDGFKKTGIPSAMWDLMEPYSRINHASGTAILAVVILVLSNLASNVPTVLLLGARVAASAAAISKEDEKKAWLILAWVSTIAGNFSLLGSAANLIVCEQARRAPNHGYTLTFWTHLKFGLPSTLIVTAIGLTLIK 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00695 532 MobiDBLite consensus disorder prediction 279 301 - -
Cca08g00695 532 MobiDBLite consensus disorder prediction 279 293 - -
Cca08g00695 532 PANTHER TRANSPORTER ARSB-RELATED 1 532 - -
Cca08g00695 532 CDD YbiR_permease 28 531 - -
Cca08g00695 532 Pfam Citrate transporter 27 479 IPR004680 GO:0016021|GO:0055085
Cca08g00695 532 PANTHER TRANSPORTER ARSB-RELATED 1 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00695 Cca-Chr8 12972915 12978895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00695 38 226 Antiporters AT3G19490 26.000 8.76e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00695 - - gmx:100791733 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00695 08 12972915 12978895 Cca02g02230 02 42832786 42839258 PCT