Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00679 ATGGATTCAAAGCAATTCGATCGTGCGGCTCGTAAGGTTCGGGTCGTGGCCAAGATCCGCGGCTTCTCGGCTCCCGAGGCTAACTCCGAACCTGTCGCTTCCAGAACTGTGGACTGGATTTCGGTGAACCGTGAAAATTTGGAGGATGTCACTGTCTCCTTCGGAGACCAATCTTCTAGTCGGTATTTGGTAGATTACTGCTATAAGGAAGATGAAGATAACGAAATGATATATTCGAAGGAGGTGAGGCCTCTTGTGTCTGCAGCTTTTGAAGGTCGTAATAGCACCATTATTGCTCATGGTGCTAGAGGTAGTGGAAAGACCCACACAATTCAGGGCTCTGCTGAGAGACCGGGTTTGGCAGTGCTTGCTGTTGCTGAGATTCTTTCAGTGGCTGAGAAAAATGGGAAATCCATAGCTGTTTCTTTCTATGAGGTTGATCATCAGGAGCGTGCCGTGGATTTATTAAATCCGGAACAGCCACCAATTCTGGTTTTTGAAGACCGTGGCAGAATTCAATTTAAAGGACTAACTCAGGTTCCTGTGAAATCCATTGCTGAATTTCAGAATTTGTACTCCACCGCATGTTTTTCACAGAAGGGAGCTCCCAAAAAAGGAGGCTGTGAAGGAGGCCGTGAACGTGTTCGAAGAATCCACATGGGATTAATTCTGCATGTCTTTTCTCAGAAGAAAAGTGTTGAAAGCCTAGTGAGCAAAATGAATTTTGTTGATTTGGCAGGTTATGAAGATGCTAGAAAGAAAAGTAGTGATGGTTCCTGTCTTGCCGAGATTAACAACAGAATTAACAAGTCAATTTATGCTGTATTAAATGTTTGTCATGCTTTGAGTACAAATGAAAGTCATGTTCCCTACCGGGAAAGCAAACTTACACGCATGCTGCAGGATTCCTTGAGGGGGACTAGCAAAATTTTATTGGTTTCCTGCTTGAACCCATCATTTTGTCAAGACACCATTTACATGGTAAGCTTGGCATCACGGGCATGTCATTGGATTCATCGGGCATCCTTAGATTCCACCAAGAAAAGTGGAACCTCATCTATAAAGATGGTGAATACTCATAAGAACCAGATATCCAAAAGTGTTTCTGGAACAACAAAGAAATTACATGGCTCTTCTAAATTAATTGGAAAAAAGGCTGATATTACTGTGAAGTCTGCAATTAAAGGAAGGAAATTGTTTGAGGAAGTCGGCCATTCTGCTGCTAAAGCTGAGAAGAAGGAAAATTCTGTTGCCCATGTTACTCAAGCATCAGAACCGTTATTGGATAATTCATTATTGGAGGCTGGAAATCATGTCGAACTCAACCCTGGACTGGAAAAGGATGATTCATTTTCAGAAGCTAGTCAGAATGTGAATTTTAATCTGATGGAGGAAAATAGTATGCAGGATGACTCGTGTTTGAATGCTAGTAGGAAAGTGGAACCCAATCCCCTTGCAGATCAGGATATTTTGGTGGATAGCGAGGATCATCAAACTCAAGCACTGTCAGTAATAGTACAAGAAGACCCCAACCTGAACAAAGAGAATAACAGTTCAAGGAAAAATGAAGATGGTTCACCATCTATCAGTTCTCAACTACGCGATCTTTCTAATAGCCTTAAGATGCTATGTTCGCTGCCAACTCCAACTCCTCTGTGCGTGCAAATACCAGAAAAGGAGTCAGTTTTACTTGATAATAAGCAGGTGTCTGCTGATGTTGCAGAACCAAAAACTCCTACCGCTGATCAAAATATGAGGGTTAATAGATGTGATGTAATGAGTGCTAAAAGTCCTTGGGAAACATACAGCATGCGTGGTTCTGGAATGAAGAATTCTCTTGTTGAAGAATACCTTAGGTTTTTAAACACAGCTAACAAGGAAGAATTAAAAAAACTGAAGGGAATTGGGGAGAAGAGAGCTACCTTCATACTTGAACTTCGAGAAGAATCCCCAGAACCTTTCAAGAATCTAGATGATTTAAAGGATATTGGACTTTCAGCAAAGCAGATTAAAGGAATGATGAAGAAGGAGGTTGGGGAACTTTTCAGTGAATTATAA 2058 0.415 MDSKQFDRAARKVRVVAKIRGFSAPEANSEPVASRTVDWISVNRENLEDVTVSFGDQSSSRYLVDYCYKEDEDNEMIYSKEVRPLVSAAFEGRNSTIIAHGARGSGKTHTIQGSAERPGLAVLAVAEILSVAEKNGKSIAVSFYEVDHQERAVDLLNPEQPPILVFEDRGRIQFKGLTQVPVKSIAEFQNLYSTACFSQKGAPKKGGCEGGRERVRRIHMGLILHVFSQKKSVESLVSKMNFVDLAGYEDARKKSSDGSCLAEINNRINKSIYAVLNVCHALSTNESHVPYRESKLTRMLQDSLRGTSKILLVSCLNPSFCQDTIYMVSLASRACHWIHRASLDSTKKSGTSSIKMVNTHKNQISKSVSGTTKKLHGSSKLIGKKADITVKSAIKGRKLFEEVGHSAAKAEKKENSVAHVTQASEPLLDNSLLEAGNHVELNPGLEKDDSFSEASQNVNFNLMEENSMQDDSCLNASRKVEPNPLADQDILVDSEDHQTQALSVIVQEDPNLNKENNSSRKNEDGSPSISSQLRDLSNSLKMLCSLPTPTPLCVQIPEKESVLLDNKQVSADVAEPKTPTADQNMRVNRCDVMSAKSPWETYSMRGSGMKNSLVEEYLRFLNTANKEELKKLKGIGEKRATFILELREESPEPFKNLDDLKDIGLSAKQIKGMMKKEVGELFSEL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00679 685 MobiDBLite consensus disorder prediction 507 532 - -
Cca08g00679 685 ProSiteProfiles Kinesin motor domain profile. 12 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00679 685 PANTHER KINESIN-LIKE PROTEIN KIN-10C 12 682 - -
Cca08g00679 685 SUPERFAMILY RuvA domain 2-like 614 676 IPR010994 -
Cca08g00679 685 PANTHER KINESIN-RELATED 12 682 IPR027640 GO:0003777|GO:0007018
Cca08g00679 685 Pfam Helix-hairpin-helix motif 621 668 - -
Cca08g00679 685 Gene3D - 609 681 - -
Cca08g00679 685 PRINTS Kinesin heavy chain signature 92 113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00679 685 PRINTS Kinesin heavy chain signature 239 257 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00679 685 PRINTS Kinesin heavy chain signature 289 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00679 685 Pfam Kinesin motor domain 37 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00679 685 Gene3D Kinesin motor domain 1 336 IPR036961 -
Cca08g00679 685 SMART kinesin_4 10 345 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00679 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 348 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00679 Cca-Chr8 12591399 12598428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00679 12 366 Calmodulin-binding Proteins AT5G65930 28.919 5.33e-28 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00679 08 12591399 12598428 Cca08g00679 08 12591399 12598428 ECH