Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00668 ATGAAAAAGAAGAATAGCGTTAGTTCTTCGTTAGGGTCCTCTATGCTCACCCATGATATTCACTCCACTGTGTTCCCCTATTTTTCTCGTTGGCAAAATTCTCACGGGAAGGTGTTCATCTACTGGCTAGGTACAGAACCATTTCTGTACATTGCAGATCCAGAATTCCTTAAAAAAATTTCAACAGAGGTGATGGCAAAGAAATGGGGAAAACCTAGAGTGTTTAGACATGACAGAGATCCCATGTTTGGAAATGGTTTGGTTATGGTTGAAGGCAATGAATGGGTTCGTCATCGACATGTTATAGCCCCAGCATTTTCTCCTCTTAACTTGAAGGCAATGGCAAACATGATGACCGAGTCTACAAATCAAATGATAGATAGGTGGATTGTACAAATTAACTCCGGCAACATTGAAATCGATGTGGAAAAAGAGGTTGTAGAAACGGCCGGAGAAATCATTGCAAAATCAAGCTTTGGCATGAAGGGTAAAAATGCAAAGGAAGTGTCTAAAAAATTACGTGCCCTACAAATGACACTTTTCAAGACAACAAGATATGTAGGGGTTCCATTTGGCAAGTGTTTCAATGTTAAGAAAACCCTAGAGGCTAAGAAACTTGGGAAAGAGATCGACAAGCTCTTGTTATCCGTCATTACATCTCGTATGAAATCAATCAAAAGACAAACTCAAGAAGACCTATTGGGATTGTTGTTGCAAGGAAACTATCAAGGTGATGGCAAGTTAGGGAATACATTCACCACTAGAGACTTGTTGGATGAGTGCAAAACATTTTTCTTTGCTGGCCATGAAACAACAGCATTGGCTATTTCATGGACTTTGTTGCTTCTAGCTATGCATGAAGATTGGCAAAACCAATTAAGAGATGAGATAAGAGAAGTGGTTGGTGATAAAGAACTTGATATCAATGTGCTTGCAGGGCTGAGAAAGATGAAATGGGTAATGAATGAAGCTCTAAGACTTTATCCAACAGCACCAAATGTGCAAAGACAAGCTAGAGAAGACATTCAAGTTGATAATTTCACGGTGCCTAATGGGACTAACATGTGGATTGATGTTGTGGGGATGCACCATGATCCAGCATTGTGGGGAAAAGATGTCAACGAATTTAGACCAGAGAGGTTCATGGATGACGTTAATGGTGGATGTAACCACAAAATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGGATGTGTGTGGGTAGGAACTTGAGCTTTATGGAGTATAAGATAGTATTAACCTTACTCCTCTCTAGATTCAGTTTTAAAGTTTCACCAGGTTATAACCATTCACCTTCTATCATGCTCTCCCTTAGACCTACTTATGGACTTCAACTCACAGTTCAACTACTTTATTAA 1377 0.3987 MKKKNSVSSSLGSSMLTHDIHSTVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLKKISTEVMAKKWGKPRVFRHDRDPMFGNGLVMVEGNEWVRHRHVIAPAFSPLNLKAMANMMTESTNQMIDRWIVQINSGNIEIDVEKEVVETAGEIIAKSSFGMKGKNAKEVSKKLRALQMTLFKTTRYVGVPFGKCFNVKKTLEAKKLGKEIDKLLLSVITSRMKSIKRQTQEDLLGLLLQGNYQGDGKLGNTFTTRDLLDECKTFFFAGHETTALAISWTLLLLAMHEDWQNQLRDEIREVVGDKELDINVLAGLRKMKWVMNEALRLYPTAPNVQRQAREDIQVDNFTVPNGTNMWIDVVGMHHDPALWGKDVNEFRPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKVSPGYNHSPSIMLSLRPTYGLQLTVQLLY 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00668 458 PRINTS P450 superfamily signature 267 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PRINTS P450 superfamily signature 319 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PRINTS P450 superfamily signature 396 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 1 452 - -
Cca08g00668 458 Pfam Cytochrome P450 22 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 Gene3D Cytochrome P450 9 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PRINTS E-class P450 group I signature 32 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PRINTS E-class P450 group I signature 256 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PRINTS E-class P450 group I signature 276 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PRINTS E-class P450 group I signature 359 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PRINTS E-class P450 group I signature 395 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PRINTS E-class P450 group I signature 405 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 452 - -
Cca08g00668 458 SUPERFAMILY Cytochrome P450 17 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00668 458 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 398 407 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00668 Cca-Chr8 12377938 12382058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00668 7 457 Cytochrome P450 AT5G52400 61.589 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00668 - - gmx:100784128 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00668 08 12377938 12382058 Cca02g02249 02 43042876 43046319 PCT
Cca02g02250 02 43065814 43068251 Cca08g00668 08 12377938 12382058 PCT