Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00665 ATGAGCTGCTTGGATATACAGATGCTTCCTCCCGGTGAATGGCATTGTCCAAATTGCACATGTAAATTTTGTGGCATAGCCCGTGGTACTTCTGAAAAAGATGATGCATCTGTGTATGTCCTACGTACTTGCAACTTATGCGAGAAGAAATATCATGACTCTTGCACTAAGGAGATGGATACCCTTCCTAATAACTTCAATACATCAAGCCTTTCTTTTTGTGGGAAAGAATGCAAAGAGGAGCATGAACTAGAAGGGGGATTTTCATGGTCTCTTGTTCATAGAACAGATGAAGACTCAGAGGCAGCTTGCAGGGGAATTACACAGAGGGTAGAATGCAATTCCAAGCTGGCTATTGCACTGACCGTGATGGATGAATGCTTTTTGCCTGTTATTGATCGGAGGAGTGGGATAAATTTAATCCGTAATGTTTTATATAATAGTGGATCAAACTTTAGTCGTTTGAGTTATAGTGGCTTTTACACTGCGATTTTGGAGAGAGGAGATGAAATCATAGCTGCAGCATCTATCAGGTTCCATGGAACTATGATAGCAGAGATGCCATTCATTGGAACTCGTCACATATATAGGCGCCAGGGGATGTGCCGCCGGCTTTTTTCTGCCATTGAATCGGCACTTTGCTCTCTGAAGGTTGAAAAGCTAGTTATTCCTGCAATTGCTGAACTCACACATACATGGACAACAGCTTTTGGCTTCACGTATCTAGATGGTTCACTCAGGCAAGAAATGAAGTCACTGAATATGATGGCCTTCCCTGGTATAGATATGTTACAAAAGTTGCTAGTGGAACAAGGAAAACATGAGGGCAATACAACCACAGGTTCTGAGAAAATGGAAAATGGAGACAATTATTTTATTGAGACCAAAATGGGAAATAGGTCAGATATGGGTTCAACTCCGCAAGATCCTCATGGAAGTGATGATGTTAGTTCAAATCCTGCTAATGAGTCAAATGATGAATGCAGCGATGCTTCTCAAGAACTAAACAACCATGTTTTGGTCGATGGCACTCTCTGTTCCAAATCTCCTTCTGATGAAATGGTGTCTGAGTCAGTCTCAGATAAATGTGTTTCTCCTTCTAGAACTAGTCACAGTGCACTACAAATGAAGAATGAATTAGTGACTGCTTCTCCTGCTGATAAATTAAATCCTTCCAAAAGTCAATCCATTTCTCTGAATGACACTTGTTTGAGTAGTCACCCATTAGATGTTCTGAAAGCTCAAACTTCGGTTCAGGAAACTGCTTGTTCAGATCCATGTTCAGCAGAAAACCTTGACAAGAAATTTCACTCATCCACTGCTATGAATTGTGATTCATCGGAACTTGACATGAATCCAGTGTTGGATTCTCAAATGGCAGACAATACTACGCCTTCTAAAGTGGTTCATATGAATGACGCTCTTGAAATTATTCCTTCAGGGAAATTATCAGGAGAGAATGTTACAAAGGGGAATAATGAAAATGTAGATGTCTCCATTTCTGCTCTCAATCATGCGAAGGACAGTTATTTGCAAGTAGGATCTGATGCCAATGGGGAAATTGGATGTGAGAATGATAAGGATTTACATTTGAACCCAGGAGTTGCTTCAAATGAAATGGATCTTGATGAAAGTGGCCTTAATGCTTCAGGTGATAGTTCCGAGACTATTCTGGTCTAA 1680 0.4054 MSCLDIQMLPPGEWHCPNCTCKFCGIARGTSEKDDASVYVLRTCNLCEKKYHDSCTKEMDTLPNNFNTSSLSFCGKECKEEHELEGGFSWSLVHRTDEDSEAACRGITQRVECNSKLAIALTVMDECFLPVIDRRSGINLIRNVLYNSGSNFSRLSYSGFYTAILERGDEIIAAASIRFHGTMIAEMPFIGTRHIYRRQGMCRRLFSAIESALCSLKVEKLVIPAIAELTHTWTTAFGFTYLDGSLRQEMKSLNMMAFPGIDMLQKLLVEQGKHEGNTTTGSEKMENGDNYFIETKMGNRSDMGSTPQDPHGSDDVSSNPANESNDECSDASQELNNHVLVDGTLCSKSPSDEMVSESVSDKCVSPSRTSHSALQMKNELVTASPADKLNPSKSQSISLNDTCLSSHPLDVLKAQTSVQETACSDPCSAENLDKKFHSSTAMNCDSSELDMNPVLDSQMADNTTPSKVVHMNDALEIIPSGKLSGENVTKGNNENVDVSISALNHAKDSYLQVGSDANGEIGCENDKDLHLNPGVASNEMDLDESGLNASGDSSETILV 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00665 559 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 155 242 IPR016181 -
Cca08g00665 559 MobiDBLite consensus disorder prediction 538 559 - -
Cca08g00665 559 MobiDBLite consensus disorder prediction 299 331 - -
Cca08g00665 559 MobiDBLite consensus disorder prediction 295 331 - -
Cca08g00665 559 CDD NAT_SF 164 223 - -
Cca08g00665 559 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 1 462 - -
Cca08g00665 559 PANTHER PHD FINGER FAMILY PROTEIN 1 462 - -
Cca08g00665 559 MobiDBLite consensus disorder prediction 543 559 - -
Cca08g00665 559 MobiDBLite consensus disorder prediction 349 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00665 Cca-Chr8 12325052 12331175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00665 3 354 PHD Transcription Factor Family AT1G05380 52.575 6.08e-118 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00665 - - ccaj:109804483 1124