Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00623 ATGATGCCTCTCAAGTCTGATGGCTCACTTTGCATTATGGAAGCCCTCACCAGATCACAATCCCAAGTGATGGTGCCAACTTCATCTCCAAAGCTTGAGGACTTTCTAGGTGGTGCAACTATGGGGGGTCAAGACTATGGAGGGCATGGAAGAGAAGCAATGGCTCTAAGCCTTGACAGCATCTACTATAGTAACCAAAATGCCGAAGCTGAAACCAACAGAGACCATTCTTCTTCTTTGGACCTTCTTTCTGACCCTTTTAGGCACCAAACCCATCCATATTACTCGGGGCTTGGGATTTACCAAGTGGAGGAAGAAGCCAAGGAACCCCAAATGCCTCAAGTGGTGGAAGAAGGCATTGCTTGCTTCAACAACTGGGTGCCACCAAGGGAATATTCTTCTTCTCAGCAGAATCTGGAGCAGCATCAAGTGAATAATAGTAGTGGTGGACTTGTGGAGGATCATGGTGCTTCTGGGGGGAATGGTGGTGTTGGCACAGTGGAGTGTGGGGAGTTACAATCTTTAAGCCTGTCTATGAGCCCCGGCTCTCAATCAAGTTGTATCACTGTTCCAACTCAGATCTCATCTTCTAATACTGAATCTGTGACTGTGGAGGCCAAAAAGAGAGGGTCTGGTAAGCTTGGTCATAAGCAACCTGTGCATAGGAAGTCCATTGACACATTTGGGCAGAGAACTTCGCAGTATAGAGGTGTTACAAGTCCacgggtcgtttcggcccatgtctga 747 0.4578 MMPLKSDGSLCIMEALTRSQSQVMVPTSSPKLEDFLGGATMGGQDYGGHGREAMALSLDSIYYSNQNAEAETNRDHSSSLDLLSDPFRHQTHPYYSGLGIYQVEEEAKEPQMPQVVEEGIACFNNWVPPREYSSSQQNLEQHQVNNSSGGLVEDHGASGGNGGVGTVECGELQSLSLSMSPGSQSSCITVPTQISSSNTESVTVEAKKRGSGKLGHKQPVHRKSIDTFGQRTSQYRGVTSPRVVSAHV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00623 248 MobiDBLite consensus disorder prediction 198 221 - -
Cca08g00623 248 MobiDBLite consensus disorder prediction 131 165 - -
Cca08g00623 248 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 242 - -
Cca08g00623 248 MobiDBLite consensus disorder prediction 131 152 - -
Cca08g00623 248 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 2 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00623 Cca-Chr8 11165279 11166247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00623 1 242 AP2-EREBP Transcription Factor Family AT4G37750 35.688 2.22e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00623 K09285 - gmx:100798179 362.459