Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00622 ATGTCGAATTTTCTGAACGAAATCTCCTCCTTGTGGTTCCTATCTTTGATACCACTGTTCATCTTCCTAGCCTTTCCCACCATTCTCAATCTTCTATCCAAATTGAATTCCAATTCAACTAAAAACTCGCCCCCATCTCCTCCAAAACTCCCCATAATAGGAAACCTCCATCAACTTGGCACTTCCCATCATCGCACACTCCAATCTCTGGCTCAAACCTATGGTCCCTTAATGTTGCTTCACTTTGGAAACGTACCAATGCTCGTGGTCTCAACCGCCGAAGCAGCGCGTGAGGTTCTGAAATCCCTAGACCACGTTTTCTGCAACAGACCACATCGTAAGATGTTTGACATCTTCTGGTATGGTTCAACAGACGTAGCATCTGCACCTTACGGCCACTACTGGAGGCAGGTGAAGAGTATCTGTGTGTTGCATCTTCTGAGTGGCAAAAAGGTTCAATCCTTTCGTAGGGTGAGAGAAGAGGAAGTTGTGCTAATGATAGAGAAAGTTAGGAAGAGTTGTTGTGACTCGAAGTTGAAGCCAGTTAACCTAACTGATTTGTTATCCGAGGTAACTAATGATATAGTGTGTAGGTGTGTTATTGGAAGGAGATATGGTGCGAGTGAGCTTAGAAGGCCTATGAGTGAGTTAGAAGAGTTGTTGGGGGCTTCGGTTTTGGGGGATTATGTGCCTTGGCTTGATTGGTTGGGAAGAGTTAATGGGGTGTATGGTAGGGCTAAGAGAGCGGCTAAACACCTTGATGAGTTTTTGgatgaagttgttgatgaacatgttagtaagagaggacatgatgatgacgatgatggtgatgaAGGGCAGAATGATTTTGTGGACATCTTGCTGCGGATTCAGAAGACAAGCTCCACCACAGAATTTCAGATTGATAGAACAATCATGAAGGCTTTGGTCATGGATATGTTTGGTGCAGGAACTGATACCACCCTTGCAGTGCTAGAGTGGGCCATGACAGAACTCTTGAGGCACCCAAATGTGATGCAAAAGCTACGAGATGAGGTGAGAGGTGTAGCTGGAGACAGGACTCACATAACTGAGGAGGATTTGAATCACATGCCCTACTTAAAAGCAGTTATTAAAGAGATTCTTAGGTTACACCCTCCATCTCCCATATTGATTCCAAGGGAATCCATGCAAGATGCCAAAGTATTGGGCTATGACATTGCAGCTGGCACACAAGTGCTGGTTAATGCTTGGGCAATTTCTACAGACCCTTCATATTGGGACCAACCTCTAGAGTTTCAACCAGAGAGATTCTTGAAGAGTGCAATTGATATCAAAGGGCATGATTTTCAATTGATTCCATTTGGAGCTGGAAGGAGGGGATGTCCAGGAATAGCATTTGCCATGATTGTGAATGAGTTGGTGCTTGCAAACATTGTGCACCAATTTCATTGGGAAGTACCTGGTGGAGTGCTGAGGGACCAGGCATTTGACATCTCTGAAACTACTGGATTGACTGTTCATAGGAAATTTCCTCTTCTGGCACTTGCATCACCTCATATGTAA 1545 0.4285 MSNFLNEISSLWFLSLIPLFIFLAFPTILNLLSKLNSNSTKNSPPSPPKLPIIGNLHQLGTSHHRTLQSLAQTYGPLMLLHFGNVPMLVVSTAEAAREVLKSLDHVFCNRPHRKMFDIFWYGSTDVASAPYGHYWRQVKSICVLHLLSGKKVQSFRRVREEEVVLMIEKVRKSCCDSKLKPVNLTDLLSEVTNDIVCRCVIGRRYGASELRRPMSELEELLGASVLGDYVPWLDWLGRVNGVYGRAKRAAKHLDEFLDEVVDEHVSKRGHDDDDDGDEGQNDFVDILLRIQKTSSTTEFQIDRTIMKALVMDMFGAGTDTTLAVLEWAMTELLRHPNVMQKLRDEVRGVAGDRTHITEEDLNHMPYLKAVIKEILRLHPPSPILIPRESMQDAKVLGYDIAAGTQVLVNAWAISTDPSYWDQPLEFQPERFLKSAIDIKGHDFQLIPFGAGRRGCPGIAFAMIVNELVLANIVHQFHWEVPGGVLRDQAFDISETTGLTVHRKFPLLALASPHM 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00622 514 Pfam Cytochrome P450 44 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 SUPERFAMILY Cytochrome P450 44 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 Gene3D Cytochrome P450 31 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00622 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Cca08g00622 514 PANTHER CYTOCHROME P450 71B11-RELATED 21 512 - -
Cca08g00622 514 PANTHER CYTOCHROME P450 FAMILY PROTEIN 21 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00622 Cca-Chr8 11127192 11131636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00622 34 511 Cytochrome P450 AT3G48270 50.625 4.38e-177 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00622 - - gmx:100813357 847.04