Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00611 ATGCTAAGGCGCATGCAAACTTTGGTGCGACTGCAGTCCCGGGCACGTGCAACTCGTGTGAACTTGTCAGATAACATGCATTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAGATTATGAGCACTCACTTCGTGCCTATAGTACGAAATATGATGGATCTTCTATTCTCAAGAGATGTAGTTCCAATGCAAATTTTAGGGACATTGACTTGGAGAAAAGCCGGTTTGGTTCTCATTGGTTAGACAGTTGGATGGAAGAAAATTCTTGGAGCCAAGCTAGAGATGCATCACTGAAAAAAGGGCACGCTGATGATGAGAAGAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTGAACTCACACCATAGTAGTGGCTCCTCATTTCAGACAACATCACATCATCATTTGTCTTCAGATTACAACAATGACAATTTTTTGGCATATGAGTCTCCATCAAAACGTTCTTCCAAGGCTCTAAATCCAAGCCTCTCTTCTAGGGAGGTTCTACCCTTTGGCACTCTGAAACTTCACAAAGGAAAAGAAGAAGCTTTGAGAAATGTTGAGGATAGTCCTCAAACATTTTCTGCCTCATCTAGGCTTGGAAGTGATTCAAGGAGAGGTCCATTCACACCAACAAAGAGTGAGTGTGGATGGAGTTTGTTCAGTGGCTACTCTGGTCATCCCAATTACATGGCAAATACTGAATCTTCAAGAGCCAAGGCTAGGTCACATAGTGCTCCAAGGCAAAGAATGGAGTTTGAGAGATACGGTTCCACAAGAAGGTCTCTTCAGGGTCTTTGGGAAGTAGGGCCTAGTTCAGATAGGGATTCTGATTTTAAGAGCAAGGCCTATGCCACCACAAGCAGCTTGAACAGAAATGGTAGTGCCAATTTAAGGTGA 915 0.4328 MLRRMQTLVRLQSRARATRVNLSDNMHSFKSSLSHYPVPEDYEHSLRAYSTKYDGSSILKRCSSNANFRDIDLEKSRFGSHWLDSWMEENSWSQARDASLKKGHADDEKSDKILEVDTWKPHLNSHHSSGSSFQTTSHHHLSSDYNNDNFLAYESPSKRSSKALNPSLSSREVLPFGTLKLHKGKEEALRNVEDSPQTFSASSRLGSDSRRGPFTPTKSECGWSLFSGYSGHPNYMANTESSRAKARSHSAPRQRMEFERYGSTRRSLQGLWEVGPSSDRDSDFKSKAYATTSSLNRNGSANLR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00611 304 MobiDBLite consensus disorder prediction 287 304 - -
Cca08g00611 304 MobiDBLite consensus disorder prediction 193 216 - -
Cca08g00611 304 MobiDBLite consensus disorder prediction 246 262 - -
Cca08g00611 304 Pfam Protein of unknown function (DUF4005) 195 268 IPR025064 -
Cca08g00611 304 MobiDBLite consensus disorder prediction 187 216 - -
Cca08g00611 304 PANTHER CALMODULIN-BINDING PROTEIN 1 302 - -
Cca08g00611 304 MobiDBLite consensus disorder prediction 237 304 - -
Cca08g00611 304 PANTHER IQ-DOMAIN 5-RELATED 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00611 Cca-Chr8 10833650 10835125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00611 1 272 IQD Protein Family AT5G62070 38.849 5.71e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00611 - - gmx:100785181 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00611 08 10833650 10835125 Cca02g02285 02 43395992 43400872 PCT