Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00587 ATGGCTGTTGCCAATAGCAACAGCAGCAATGAACCTTGTACTTCATACAATTGTTACAAAGTAGCAGGTTTGACTGAGACCATATTAGACACAAATCATGTATATAATTTAAAAGATCGGTACATTCTCGGCGAGCAATTGGGTTGGGGGCAGTTTGGTGTCATAAGAGCATGTTCCGACAAGTTGACAGGAGAGGTTTTGGCCTGCAAATCAATTGCGAAAGATAGGTTGGTTACTTTGGATGATTTGAGGAGTGTGAAGCTTGAGATAGAGATAATGGCTAGGCTATCTGGGCACCCCAATGTTGTGGATCTCAAAGCAGTTTATGAAGAGGAAGGTTTTGTTCACTTGGTGATGGAGCTTTGTGCTGGAGGGGAGCTGTTTCACAGATTAGAGAAGAACGGGTGGTTTTTAGAATCTGAAGCCAGGGTTCTCTTTAGGCACCTAATGCAGGTGGTTTTGTATTGTCATGAGAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCAACAAGATCCTCCTCATCTCCTATTAAATTGGCAGATTTTGGACTTGCAACATACATCAAGCCTGGTCAGAGTTTGCACGGGTTAGTTGGGAGTCCATTTTATATAGCTCCAGAGGTACTGGCTGGTGCATATAACCAGGCTGCTGATGTGTGGAGTGCAGGTGTTATTCTTTACATTCTGTTGAGCGGAATGCCTCCGTTTTGGGGGAAGACCAAATCACACATTTTTGAAGCTGTTAAAGCTGCTTCCCTGAAGTTTCCTTTGGAACCTTGGGATCGCGTTTCTGAATCAGCTAAGGATTTGATCAAGGGAATGTTGTGCACTGATCCTTCTCGAAGGCTCACTGCACGAGAGGTTTTAGATCATTGCTGGATGGAGGACAACCAAACAAATCCCGAACAACTAAGTGAACATAAAATCCAAAGTTGTGAAGAAGGCAATATTGGCAGCAGCTCATTCTCTGCCTCTTTTATGTCCAGGAATCAGGACATCAGCTTTGGCGCTGGCTCACCAACTTGTGATGCTCAATCACCTACGTTCACATGCAGATCATCATTTTCATCTTTTTTGGTGGAACCAGTCACTCCATTTCTAGTTTCTGGTGGGTTTTCATTCAAGAGTGTGGGCGATTCCACTTGTTTGGAATTTTCTTCTCCTGTTCCCTCGGTGCTTAGCTTTTCATTCCTCAGCCCCACTTCTGTTGTTGAGCAAAAGAGTTGTAAATTAGAGTGCTCAGCTAACATGTCAGATGTAAATGCAATTGCTGGAGAAGCAAACTTGGGAAAGTTGCTAGTGCTACAAGATTCTCCCCTTTGCATTGGACGCGAAGTTAATGAAACGGATCGCAAGCCTGTAGATGCTAAAAGGGCAAGTGGAATGAATGGACATAGGATGCTGGGAATCCACAGCAAGAGAAACAGGACAATTGGACTTGGTGAATGTGAGCAACTTGACCTTGTGGTGACTGAATCAGTCATCCGTTGGTCATCGTGCACTCAGCTACCTACATCTTTGAGATCATCTCTTGTCTGCTAA 1557 0.4393 MAVANSNSSNEPCTSYNCYKVAGLTETILDTNHVYNLKDRYILGEQLGWGQFGVIRACSDKLTGEVLACKSIAKDRLVTLDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKNGWFLESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSHIFEAVKAASLKFPLEPWDRVSESAKDLIKGMLCTDPSRRLTAREVLDHCWMEDNQTNPEQLSEHKIQSCEEGNIGSSSFSASFMSRNQDISFGAGSPTCDAQSPTFTCRSSFSSFLVEPVTPFLVSGGFSFKSVGDSTCLEFSSPVPSVLSFSFLSPTSVVEQKSCKLECSANMSDVNAIAGEANLGKLLVLQDSPLCIGREVNETDRKPVDAKRASGMNGHRMLGIHSKRNRTIGLGECEQLDLVVTESVIRWSSCTQLPTSLRSSLVC 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00587 518 Gene3D Transferase(Phosphotransferase) domain 1 128 333 - -
Cca08g00587 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Cca08g00587 518 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00587 518 CDD STKc_CAMK 40 298 - -
Cca08g00587 518 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00587 518 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 5 511 - -
Cca08g00587 518 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Cca08g00587 518 SUPERFAMILY Protein kinase-like (PK-like) 38 364 IPR011009 -
Cca08g00587 518 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00587 518 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Cca08g00587 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00587 Cca-Chr8 9893742 9897451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00587 37 306 EF-hand Containing Proteins AT3G57530 50.741 1.99e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca08g00587 Pkinase 3.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00587 - - gmx:100776088 942.184