Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00581 ATGTTCCCTCACCAACACCGCCAACTTCCTCCTCAACCGCACTTCCTCCTCTACCATCCGCAAAACGCAGCTTCTTGGCGTCGTTTTCGAGGACCTGATTTGCGTTTCCAATTCCAACTCCGTTTTGTTCCCTTACTTTCTCATCCTCTGCGCCTCGAGAAAATGTACATCGTTCTCCACAAGATCAAAACGCTAATTGAAGATTGCTCCAATGGAAGAAGCAAGTTCAATCTGCTCGTGCAAATCGAAACAGTCGCCGACACCTTCCACGGGCTCACCGGAGAACTTTCCACGCTCCTCGATGTTTTCCCTCTCCAAGAACTCCACCTAAACGATGACGTTCAGGAACTCGTTATCCTCTTGCGGAAACAGTGCTCTGAATCCATACCGTTTGTCGGAGCCGAACAGATTTCTTGTGTAAGTTGTTGCTTTCTGTATAAATACGAAGATCTATGTTGCCAGTGTTGTAAGATTTGA 477 0.4717 MFPHQHRQLPPQPHFLLYHPQNAASWRRFRGPDLRFQFQLRFVPLLSHPLRLEKMYIVLHKIKTLIEDCSNGRSKFNLLVQIETVADTFHGLTGELSTLLDVFPLQELHLNDDVQELVILLRKQCSESIPFVGAEQISCVSCCFLYKYEDLCCQCCKI 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00581 158 PANTHER U BOX DOMAIN-CONTAINING 48 136 - -
Cca08g00581 158 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 48 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00581 Cca-Chr8 9760443 9760919 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00581 47 138 U-box Gene Family AT5G01830 50.000 1.76e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00581 - - ccaj:109792769 267.314