Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00574 ATGTACATCGTTCTCCACAAGATCAAAACGCTAATTGAAGATTGCTCCAATGGAAGAAACAAGTTCAATCTGGTCGTGCAAATCGAAACCTTTGCCGACACCTTCCACAGGCTCACCGGAGAACTCTCCACGCTCCTCGATGTTTTCCCTCTCCAAGAACTCCACCTAAACAACGACGTTCGGGAACTCGTTATCCTCTTGCGGAAACACTGCTCTGAATCCATACCGTTTGTCGGAGCCGAACAGATTTCTTGTGTAAGTTGTTGCTATCTGTATAAATACGAAGATCTGTGCTGCCAGTGTTGTAAGatttga 315 0.4508 MYIVLHKIKTLIEDCSNGRNKFNLVVQIETFADTFHRLTGELSTLLDVFPLQELHLNNDVRELVILLRKHCSESIPFVGAEQISCVSCCYLYKYEDLCCQCCKI 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00574 104 PANTHER U BOX DOMAIN-CONTAINING 1 82 - -
Cca08g00574 104 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00574 Cca-Chr8 9643410 9643724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00574 1 84 U-box Gene Family AT5G01830 44.048 5.40e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00574 - - ccaj:109792769 160.229