Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00555 ATGTCGAATCAAAGCGTTGACCCCTATCAGCACCTTGGATTCCTCCGCAACCGCGACGGCACCGTCACGCGATTAAACGACGGCGTTCCGCGCACCGAGGCCTCTTCGGATCCCTCTCTACCCATTCCAGTTCTGACGAAAGACCTAACCATGAACCAAAGAAACAACACCTGGCTTCGCCTATTCCTGCCCCGAATAGCACTCTCCTCTCCCAACAAGCTTCCTCTCATTATTTTCTTTCACGGTAGCGGCTTCGTGGTGATGAGTGCGGCTACGTCCATGTTCCATGATTTCTGCGTCCAAATGGCCAACATCACCGAGGCCGTCGTGGCCTCCGTCGACTACCGCCTCGCGCCAGAGCACCGTCTCCCGGCGGCGTACGACGACGGCGTGGAAGCGCTGCGGTGGATCCGAAGGAGCGACGAAGAGTGGTTGACGCAATATGTGGACTACTCAAAGTGTTATCTTATGGGGAATAGCGCTGGGGCCACTCTCGCTTATCATGCAGGCCTACGTGCAACTGAAGAGGTGAATGATCTTGAGCCACTGAAGATCCAAGGGTTGATATTGCGTCAACCATTCTTTGGTGGAACGCAGAGGAGCGAGTCAGAGTTAAGACTCGAGAATAATCCAGTAATTCCATTGTGTGTTACTGATTTGATGTGGGAGTTGGCACTACCAATTGGTGCTGATCGTGACCATGAATATTGCAATCCATGGTCAGGGAATGGGGTTCAGAAATTTGATAAACTGAAGGAGCTTGGGTGGAGGGTATTGGTGAGTGGAAATGGTGAAGACCTGCTTGTGGATCGTGAGATAGAGCTAGCACAATTGATGGAAGAAAAAGGGGTGCAAGTGGTGAAGGACTTTGTAGAAGATGGGTCTCATGGAGTTGAAATTTTTTACCCATCCAAAGCAAACAAATTCATTGCCTTAGTCAAAGATTTCATTTACATGATTGATGCTTAG 969 0.5015 MSNQSVDPYQHLGFLRNRDGTVTRLNDGVPRTEASSDPSLPIPVLTKDLTMNQRNNTWLRLFLPRIALSSPNKLPLIIFFHGSGFVVMSAATSMFHDFCVQMANITEAVVASVDYRLAPEHRLPAAYDDGVEALRWIRRSDEEWLTQYVDYSKCYLMGNSAGATLAYHAGLRATEEVNDLEPLKIQGLILRQPFFGGTQRSESELRLENNPVIPLCVTDLMWELALPIGADRDHEYCNPWSGNGVQKFDKLKELGWRVLVSGNGEDLLVDREIELAQLMEEKGVQVVKDFVEDGSHGVEIFYPSKANKFIALVKDFIYMIDA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00555 322 SUPERFAMILY alpha/beta-Hydrolases 38 317 IPR029058 -
Cca08g00555 322 PANTHER ARYLACETAMIDE DEACETYLASE 3 317 - -
Cca08g00555 322 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 3 317 - -
Cca08g00555 322 Pfam alpha/beta hydrolase fold 77 298 IPR013094 GO:0016787
Cca08g00555 322 Gene3D alpha/beta hydrolase 9 319 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00555 Cca-Chr8 9140557 9148751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00555 9 286 Carbohydrate Esterase AT5G16080 35.254 2.41e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00555 - - gmx:100795069 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00555 08 9140557 9148751 Cca02g02315 02 43884931 43886388 PCT