Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00554 ATGTCGAATCAAAGCGTTGACCCCTATCAACACCTTGGATTCATCCGCAACCCCGACGGCACCTTCACGCGATTAAACAAAGCCGTTCCGCGCACCGAGGCCTCTTCGGATCCCTCTCTTCCCATTCCAGTTCTGACGAAAGACCTAACCATGAACCAAAGAAACAACACCTGGCTTCGCCTATTCCTGCCCCGAATAGCACTCTCCTCTTCCAACAAGCTTCCTCTCATTATTTTCTTTCACGGTAGCGGCTTCGTGGAGCTGAGTGCGGCTACGCCCATCGCCGCCTCCTCCATGTTCCACGACTTCTGCCTCGCCGCCTCCGCCGCCCTCCCCGCCGTCATCGCCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCGCCTCCCCGCCGCCTACAACGACGCCGCCGAGGCGCTCACCTTCATCAGAAACAGCAGCGACGAGTGGCTCACGAAGCACGCCGACGTCGGGAACTGTTACCTCATGGGGAACAGCGCCGGGGGGAATATCGCCTACTTCGCGGGCCTACGTGCGGCCGAGAGTGCCCTCGATCTCGCGCCCTTGAAGATCAGAGGGCTGATACTGCGGCAACCGTTTTTCGGTGGGACCCAGCGGAGTGGGTCGGAGCTGAGGCTTGAGTACGATGATGTTCTTCCGTTGAGTGTTGCGGATTTGTGTTGGGAGCTGGCGTTGCCGGTTGGCGTTGACACTGATCACGAGTATGCGAATCTGAGGGCTGAGAATTCGGTTGGGAAATTGGAGAGGGTGAGGGAGTTGGGGTGGAGGGTGTTGGTGAGTGGGAACCATGGGGACCCCGTTGTGGATCGTGGTCACGAGTTGGTGAGGGTGTTGGAGGAGAATGGTGTGGAGGTTGTGAATGATTTTGATGAAGAAGGGGGTCATGGAGTAGAGTATAAAGATGCCGGCAAAGCAAAGAGACTCATTGAGCCTCACCACGGGTTGAACTCATGA 972 0.5792 MSNQSVDPYQHLGFIRNPDGTFTRLNKAVPRTEASSDPSLPIPVLTKDLTMNQRNNTWLRLFLPRIALSSSNKLPLIIFFHGSGFVELSAATPIAASSMFHDFCLAASAALPAVIASVEYRLAPEHRLPAAYNDAAEALTFIRNSSDEWLTKHADVGNCYLMGNSAGGNIAYFAGLRAAESALDLAPLKIRGLILRQPFFGGTQRSGSELRLEYDDVLPLSVADLCWELALPVGVDTDHEYANLRAENSVGKLERVRELGWRVLVSGNHGDPVVDRGHELVRVLEENGVEVVNDFDEEGGHGVEYKDAGKAKRLIEPHHGLNS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00554 323 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 3 319 - -
Cca08g00554 323 Pfam alpha/beta hydrolase fold 77 302 IPR013094 GO:0016787
Cca08g00554 323 SUPERFAMILY alpha/beta-Hydrolases 39 308 IPR029058 -
Cca08g00554 323 PANTHER ARYLACETAMIDE DEACETYLASE 3 319 - -
Cca08g00554 323 Gene3D alpha/beta hydrolase 9 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00554 Cca-Chr8 9090216 9126741 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00554 55 313 Carbohydrate Esterase AT5G16080 34.944 4.41e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00554 - - ccaj:109818732 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00554 08 9090216 9126741 Cca02g02316 02 43889398 43890691 PCT
Cca02g02315 02 43884931 43886388 Cca08g00554 08 9090216 9126741 PCT