Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00552 ATGAATTTCACCATGTCAAATGAAGCCGTTGACCCCTACCAGTACCTACAGTTCCTCCGCAACCCCGACGGCACCTTAACGCGTTTAAACGACGCCGTTCCGCGCACCGAACCCTCTTCGGACCCCACTCTTCCCATTCCAGTTCTGACGAAAGACCTAACCCTAAACCAAAGAAACAACACCTGGCTTCGCTTATTCCTACCCCGAGTTGCATTATCCTCTTCCAAGAAGCTTCCTCTGATTGTTTTCTTTCACGGTAGCGGCTTCGTGCTGCTGAGTGCGGCCACGTCCATGTTCCATGATTTCTGCGTCGAACTGGCCAACACCGCAGAGGCCGTTGTGGCCTCCGTCGACTACCGCCTCGCGCCGGAGCACCGTCTCCCGGCGGCGTACGAGGACGGCGTGGAGGCGCTGCGGTGGATCGGAAGGAGCGACGAAGAGTGGTTGACGCGATATGTGGACTATTCAAAGTGTTATCTTATGGGGAGTAGCGCTGGGGCCACCATCGCTTATCATGCAGGTCTACGTGCAATTGAGGAGGTGAGTGATCTTGAGCCACTAAAGATCCAAGGATTGATATTGCGTCAACCATATTTTGGTGGGATGCAGAGGACTGAATCAGAGGTAATGCTTGAGAATAACCCAGTTATTCCATTGTGTGTTTCTGATTTGATGTGGGAGTTGGCACTGCCAATTGGTGCTGATCGTGACCATGAATATTGCAATCTAAGGTCAGGGAATGGGGTTGAGAAATTTGATAAAATGAAGGAGCTTGGGTGGAGGGTATTGGTGAGTGGAAATGGTGGAGATCCACTCGTGGATCGTGAGAAAGAGATAGCACTGTTGATGGAGGAAAAAGGGGTGCAAGTAGTGAAGGACTTTGAAGAAGAAGGGTTCCATGGGGTAGAAATTTTTGAGCCATCCAAAGTAAAACAACTCATTGCATTAGTGAAAGATTTCGTTTACATAATTGGTGCTTAG 981 0.4985 MNFTMSNEAVDPYQYLQFLRNPDGTLTRLNDAVPRTEPSSDPTLPIPVLTKDLTLNQRNNTWLRLFLPRVALSSSKKLPLIVFFHGSGFVLLSAATSMFHDFCVELANTAEAVVASVDYRLAPEHRLPAAYEDGVEALRWIGRSDEEWLTRYVDYSKCYLMGSSAGATIAYHAGLRAIEEVSDLEPLKIQGLILRQPYFGGMQRTESEVMLENNPVIPLCVSDLMWELALPIGADRDHEYCNLRSGNGVEKFDKMKELGWRVLVSGNGGDPLVDREKEIALLMEEKGVQVVKDFEEEGFHGVEIFEPSKVKQLIALVKDFVYIIGA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00552 326 PANTHER ARYLACETAMIDE DEACETYLASE 7 321 - -
Cca08g00552 326 Gene3D alpha/beta hydrolase 13 323 IPR029058 -
Cca08g00552 326 Pfam alpha/beta hydrolase fold 81 302 IPR013094 GO:0016787
Cca08g00552 326 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 7 321 - -
Cca08g00552 326 SUPERFAMILY alpha/beta-Hydrolases 39 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00552 Cca-Chr8 9035283 9037670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00552 23 322 Carbohydrate Esterase AT5G16080 34.796 3.81e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00552 - - gmx:100795069 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00552 08 9035283 9037670 Cca08g00552 08 9035283 9037670 ECH
Cca02g02316 02 43889398 43890691 Cca08g00552 08 9035283 9037670 PCT