Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00545 ATGGCCAACACCCTAATGGGAAACATGGGTTGCTTTCTAACAAGCTATCTCCTATTCTGCACAATGTTGATCTCAGCAAATGCTCAATTTGCTAAGAAGACTTATCTCATTCAAATGGATAAGTCAGCAATGCCAAAAACCTTCCCCAACCACCTTGAATGGTATTCATCAAAGGTGAAATCAGCATTGTCCACATCCCCAGAAGCTGAAATGGACAATGAAGAGAGAATAATTTACACTTACCAGAATGCTTTTCATGGTGTTGCAGCCAAGTTGACTGAAGAAGAAGCTGAGAGGCTAGAGGCAGAAGAAGGTGTTGTGGCCGTATTCCCTGAGACAAAGTATGAGCTACACACCACAAGAAGTCCTACATTCCTTGGGCTTGAACCAGCAAAAGGCAATATATTCTGGTCAGAAAAGCTAGCTGGCCATGATGTTATAGTGGGAGTGTTGGACACTGGCATTTGGCCAGAGAGTGAAAGCTTCCATGATGTAGGAATGAGACCAGTGCCTGCTCATTGGAAAGGCGCCTGTGAGATTGGAACAGACTTCACAAAAAGTCACTGCAATAGGAAGGTTGTGGGTGCAAGAGTGTTCTACCATGGATATGAAGCAGCAATTGGTAAAATTAATGAGCAAAAAGAGTATAAATCAGCAAGAGATCAAGATGGTCATGGTTCTCACACAGCAGCTACAGTTGGTGGCTCTCCAGTGCTAGGGGCTAACCTTCTTGGTTATGCTAATGGCACAGCTAGAGGAATGGCACCGGGTGCAAGAATTGCAGCTTACAAAGTGTGTTGGATTGGTGGGTGCTTCAGCTCAGATATTGTATCAGCTATTGATAAGGCTGTAGCTGATGGAGTGAATGTTCTTTCCATCTCTTTGGGTGGTGGAGTGTCCTCTTATTACAGAGATAGTTTATCTGTGGCTGCATTTGGAGCAATGGAGAAGGGTGTTTTTGTTTCATGTTCTGCTGGAAATGCTGGACCTGACCCTGCCAGCCTCACCAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGGGATTTCCCTGCAGATGTTAAGCTTGGGAATGGTAAAATAATGACTGGAGTTTCACTCTATAAAGGGCAAAGTGTGCTATCAATTAAGAAACAATACCCTTTGGTGTACTTGGGGAGCAACTCTAGTAGGGTTGATCCAAGATCCATGTGCTTGGAAGGGACTTTGGATCCTAAAGTGGTTTCAGGGAAGATAGTAATTTGTGATAGAGGCCTTAGTCCTAGAGTGAAGAAGGGACATGTGGTGAGAAGTGCAGGAGGGGTGGGAATGATTCTCACAAATTCTGAAGCTAATGGGGAAGAACTGGTTGCAGATTGCCACCTCCTGCCAGCAGTTGCAATAGGAGAGAAAGAAGGAAAGGAGCTCAAAAACTATGTCTTAACAAGTAAAGGTGCTACTGCAACTCTAGCTTTTAAGGGCACAAGGTTGGGGATTAGGCCATCTCCTGTAGTGGCAGCATTTTCATCAAGAGGGCCTAATTTTCTCACCCTTGAAATTCTGAAGCCTGATTTAGTGGCTCCAGGGGTGAACATTCTTGCTGCATGGAGTGATGCCATTGGTCCATCAGGTTTGAAAATAGACAACAGGAGAGTAAAATTCAATATACTGTCTGGAACCTCGATGTCATGCCCTCATGTGAGTGGCATAGCAGCATTGCTGAAGGCTAGGCACCCTGATTGGAGTCCTGCTGCTATAAAATCTGCTTTGATGACAACAGCTTATGTTCTTGACAACACCAAGAAAACTCTCAGAGATGCCTCAACTGCTAAACCCTCAAGTCCTTATGATCATGGTGCTGGACACATTGACCCTATTAGAGCTCTTGACCCTGGTTTGGTCTATGACATTGCGCCACAGGATTACTTTGAATTCCTATGCACACAGAAGCTCACCCCAAACCAACTAGGAGTTTTTGCCAAATATTCAAACAGATCTTGCAGACACTCTCTTGCAAGTCCGGGGGACTTAAACTACCCTGCCATATCCTCAGTGTTTACCAAGAAAGCAGCAACTTCATTTTCCAGTCCTGTGATTGTTCACAGAACTGTCACCAATGTTGGTCAACCTGTTTCAAAATACAATGTTGTGGTCTCACCATTCAAAGGCGCTTCTGTCAAAGTTGAGCCGCAAACCTTGAATTTCACCAGGAAATACCAGAGGCTGTCTTACAAGATTACCTTCACACCAACGATTCGGCAAGCCTCGCCCGAATTTGGAAGTCTGGAATGGAAGGATGGTGTGCACATTGTGAGAAGCCCTATTGTGATAACGTGGTTGTCACCACCAATGTGA 2346 0.448 MANTLMGNMGCFLTSYLLFCTMLISANAQFAKKTYLIQMDKSAMPKTFPNHLEWYSSKVKSALSTSPEAEMDNEERIIYTYQNAFHGVAAKLTEEEAERLEAEEGVVAVFPETKYELHTTRSPTFLGLEPAKGNIFWSEKLAGHDVIVGVLDTGIWPESESFHDVGMRPVPAHWKGACEIGTDFTKSHCNRKVVGARVFYHGYEAAIGKINEQKEYKSARDQDGHGSHTAATVGGSPVLGANLLGYANGTARGMAPGARIAAYKVCWIGGCFSSDIVSAIDKAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEKGVFVSCSAGNAGPDPASLTNVSPWITTVGASTMDRDFPADVKLGNGKIMTGVSLYKGQSVLSIKKQYPLVYLGSNSSRVDPRSMCLEGTLDPKVVSGKIVICDRGLSPRVKKGHVVRSAGGVGMILTNSEANGEELVADCHLLPAVAIGEKEGKELKNYVLTSKGATATLAFKGTRLGIRPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWSDAIGPSGLKIDNRRVKFNILSGTSMSCPHVSGIAALLKARHPDWSPAAIKSALMTTAYVLDNTKKTLRDASTAKPSSPYDHGAGHIDPIRALDPGLVYDIAPQDYFEFLCTQKLTPNQLGVFAKYSNRSCRHSLASPGDLNYPAISSVFTKKAATSFSSPVIVHRTVTNVGQPVSKYNVVVSPFKGASVKVEPQTLNFTRKYQRLSYKITFTPTIRQASPEFGSLEWKDGVHIVRSPIVITWLSPPM 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00545 781 Pfam Peptidase inhibitor I9 34 118 IPR010259 -
Cca08g00545 781 Gene3D Peptidase S8/S53 domain 145 639 IPR036852 GO:0004252|GO:0006508
Cca08g00545 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 118 IPR037045 -
Cca08g00545 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 775 IPR045051 -
Cca08g00545 781 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Cca08g00545 781 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Cca08g00545 781 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Cca08g00545 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Cca08g00545 781 Pfam Subtilase family 143 599 IPR000209 GO:0006508|GO:0008236
Cca08g00545 781 SUPERFAMILY Subtilisin-like 117 630 IPR036852 GO:0004252|GO:0006508
Cca08g00545 781 Gene3D - 643 777 - -
Cca08g00545 781 Gene3D - 351 495 - -
Cca08g00545 781 CDD Peptidases_S8_3 115 592 IPR034197 -
Cca08g00545 781 Pfam Fibronectin type-III domain 673 774 IPR041469 -
Cca08g00545 781 ProSiteProfiles Serine proteases, subtilase domain profile. 114 626 - -
Cca08g00545 781 CDD PA_subtilisin_like 357 487 - -
Cca08g00545 781 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 22 775 - -
Cca08g00545 781 Pfam PA domain 383 473 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00545 Cca-Chr8 8845995 8848796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00545 32 779 Subtilisin-like Serine Gene Family AT5G51750 70.895 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00545 - - gmx:100794709 1416.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02323 02 43978870 43981611 Cca08g00545 08 8845995 8848796 ECH
Cca08g00545 08 8845995 8848796 Cca08g00545 08 8845995 8848796 ECH
Cca08g00545 08 8845995 8848796 Cca02g02323 02 43978870 43981611 PCT