Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00531 ATGGCCACGGCGATTCCCAAGAAACGGCGCGCGTTTTGGCTCTGCTGCTGCGTTTTGTGCCTCGCGATCTGCGCTAGGGTTTGCGGCGCGGCCAGATCCGACCAGGAGACGCGCGAGAGGTTCTACGGCAACATGCTCAACTCCTCCTCGCCCGAATCCAACAACACCTTCGCCAAGATGTTCGATCGCGTTCTCGAGAAGGAGTTTTCCGATAATGACCAACCCGAAGAAGCCGATAAAAGCAGCTTCAATAGCAGTGTAGCTGATCAGCAGGCTGTATTGGAGACTGTAGCTAAAATTACTCATGAGAAAGCAAAGAGAAATGATACACATGAGGGAAATGGCACAAGATCATTTCAGTTTCAAGATGTTTTCTCTCTGGAAAATGAAGATTCTGATGACGTGACAACTTTGATTGACAAAAAGGACAATGTTTTTGTGATGTCAAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTGAGGTTAATATCAGATTTGGTGGTTGCCATAGTTTCAGCAGCCATTGGTGGAATTGTCTTTTCCTGTTTGGGGCAACCGGTTATTGTGGGCTATCTTCTTGCAGGCTCCCTTATTGGACCTGGCGGTTTGAAATTCATCAGTGAAATGGTGCAGGTTGAGACTGTTGCACAATTTGGTGTAGTGTTTCTTCTCTTTGCTTTGGGGCTTGAGTTTTCCCTGGCAAAGTTAAAAGCTGTAGGGCCTGTTGCTGTTCTTGGAGGACTACTTCAAATTGTCATTTTTATGTTCATGTGTGGTATTCTTTCCATGATATTTGGAGCGAATTTGTCTGAGGGTGTTTTTGTTGGTTCCTTTCTGTCGATGTCATCAACAGCAGTAGTGGTAAAGTTTTTGGTGGAGCGGAATAGTAGTAATGCTCTTCATGTTCAGATTACAATTGGAACTCTTATTTTTCAGGATTGTGCTGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGCGGTCTTTTACAAGGAATAATGTCAATGGGAAAACTGTTGCTGATACTGTCCTTGTATATCACTGCTACATCTATATTGTCTTGGTCGTTTGTTCCTCGCTTTCTTAAACTGATGATGCGGCTGTCATCTCAGACTAATGAACTTTACCAGCTAGCTGCTGTTGCTTTTTGCTTGTTATCTGCATGGTGCAGTGATAAGCTTGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCCACAACGGACTTTGCTCAACATACTTTGGACCAGGTGGAACCAATTCGTAATCTATTTGCAGCTCTCTTTCTCTCAAGTATTGGAATGCTTATACATGTGCACTTCCTTTGGAACCATGTGGATATCTTGCTGGCATCTGTTATTCTGGTTGTAGTTGTTAAAACTGCTGTTGCTGTTATAGTTACGAAGGCCTTTGGTTATAGCCTTAAGACAGCATTTATTGTTGGTATCTCACTTGCTCAAATTGGAGAATTTGCTTTTGTCCTCCTGAGTCGAGCTTCAAATCTTCACCTTGTTGAGGGGAAAATGTATCTTCTTCTTCTAGGGACAACGGCTCTCAGTCTGGTTACGACCCCACTTTTGTTTAAATTGATACCTGCTGTCATGAATCTGGGTATTCTCATGCACTGGTTCCCCGCTGAAAGTAGCCCGCAAAATGAGGGGAAAGCTTTGGTGAATGAAGCAAACAGAATGTTGTGA 1725 0.4348 MATAIPKKRRAFWLCCCVLCLAICARVCGAARSDQETRERFYGNMLNSSSPESNNTFAKMFDRVLEKEFSDNDQPEEADKSSFNSSVADQQAVLETVAKITHEKAKRNDTHEGNGTRSFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVAIVSAAIGGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGPVAVLGGLLQIVIFMFMCGILSMIFGANLSEGVFVGSFLSMSSTAVVVKFLVERNSSNALHVQITIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIMSMGKLLLILSLYITATSILSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVVVVKTAVAVIVTKAFGYSLKTAFIVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGILMHWFPAESSPQNEGKALVNEANRML 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00531 574 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 34 564 IPR045158 GO:0015386|GO:0071805|GO:1902600
Cca08g00531 574 Pfam Sodium/hydrogen exchanger family 169 538 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca08g00531 574 Gene3D - 162 545 IPR038770 -
Cca08g00531 574 PANTHER K(+) EFFLUX ANTIPORTER 6 34 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00531 Cca-Chr8 8665788 8679619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00531 31 572 Antiporters AT5G51710 81.434 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00531 - - gmx:100799476 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00531 08 8665788 8679619 Cca08g00531 08 8665788 8679619 ECH