Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca08g00530 | ATGGAAGAGGGTGTGCAGAGAAACCTCTTTCTGTTCCTTGTTCTGCCAATGGAGCTCCTGCTGCTTCTCTCTTCTTTTGCTTTGCCTCTCAGTGATGAAGGACAAGCATTGATGAAGATTAAGGCTTCATTCAGCGATGTAGCAGATGTTCTGCATGATTGGGATGATTTGCAGAATGATGATTTCTGTTCTTGGCACGGAGTCTTGTGTGGCAATGTCAGCCTTACAGTGCTTTCTCTGAATTTGTCCAGCTTGAACCTTGGTGGGGAGATATCGCCTGCCATCGGTGACTTAGTAAACTTGCAATCCATAGACCTGCAGGGTAATAAACTAACTGGTCAAATTCCAGATGAAATTGGGAACTGTGCTGCTCTTGTTCATCTGGATTTGTCTGATAATCAGCTATACGGTGATATACCTTTCTCCATATCAAAGCTAAAGCAGCTTGTGTTTTTGAATTTAAAAAGTAATCAGTTGACTGGTCCTATCCCCTCAATTTTAACCCAACTTCCAAACTTGAAGACTCTTGATCTTGCACGAAATAGACTCGCAGGTGAGATTCCAAGACTACTCTATTGGAATGAAGTTCTGCAGTACCTTGGGTTGCGAGGGAACATGTTGAGTGGAACTCTGTCCCCTGATATCTGTCAATTAACCGGTTTGTGGTATTTTGATGTGAGGGGCAATAATCTGACTGGCACCATACCTGATAGCATTGGAAACTGTACAAATTTTGAAATCTTGGATCTATCATATAATCAGATTTCTGGGGAAATTCCCTATAATATTGGGTTTCTCCAAGTAGCTACTTTGTCACTTCAAGGAAACAGACTAACAGGGAAAATTCCGGAAGTCATTGGTTTAATGCAAGCCCTTGCCATTTTGGATTTGAGTGAGAATGAGCTGGTAGGACCTATCCCTCCCATACTAGGCAATTTGACTTTTACTGGCAAGCTGTACCTTCATGGAAACATGATTACTGGACCAATACCCCCGGAACTTGGTAATATGTCAAGACTAAGCTACCTGCAATTGAATGACAATCAGTTAGTTGGCAAAATTCCAGATGAACTCGGGAAGCTTGAAAATTTGTTTGAATTGAATCTTGCCAATAATCATCTTGAAGGATCTATTCCACTTAACCTTAGCTCCTGTACTGCCTTGAATAAGTTTAATGTGCATGGTAATCATTTAAGTGGTTCAATTCCTTTGAGCTTTCGCAGCCTTGAGAGCTTGACTTTCTTAAATCTTTCTGCAAACAACTTCAAAGGGAGTATACCTGCTGAATTGGGCCATATAATAAATCTTGATACACTGGATCTGTCTAGCAATAACTTTTCAGGGCATGTTCCAGGATCTGTTGGTTATCTTGAGCATCTTCTGACCTTGAACCTGAGCCATAATAGTTTTCAGGGGCCCTTGCCTGCTGAATTTGGGAACCTTAAAAGCATACAGACTATTGATATGTCATTCAACTATCTGTCTGGTAGCATACCCCCAGACATTGGTCAGCTGCAGAATCTTGTGTCTCTGATCTTGAACAACAATGATTTGCATGGGAAGATTCCAGATCAGCTTGCCAACTGCTTAAGTCTTAACTCCCTGAATGTCTCGTACAATAACTTATCTGGTGTCATTCCTCCTATGAAGAACTTCTCACGGTTTTCTTCTGACAGCTTCATTGGAAATCCATTATTATGTGGGAATTGGTTAGGATCAATATGTGATCCTTACCTGCCAAAATCCAGAGTGGTTTTTTCAAAGGCTGCAGTTGTTTGTCTCGTTGTTGGTAGCATCACATTATTGGCCATGGTAATTATTGCTATCTACAGATCAAGCCAATCAATGCAATTGATTAAAGGATCTAGTGGAAATGGCAGCGGGCCGCCCAAGCTTGTAGTTCTTCATATGGGTTTGGCCATTCACACCCTTGATGATATTATGAGAGTGACTGAAAATCTCAATGAGAAGTATATCATAGGGTATGGTGCCTCAAGCACTGTATACAAGTGTGTTTTGAAGAATTCCCGGCCAATTGCTATTAAACGACTATACAACCAGCATGCTCACAACTCAAGGGAGTTTGAGACAGAACTTGAAACTATTGGCAGTATCAGACACAGGAATCTTGTCACTTTGCATGGTTATGCTCTAACTCCTAATGGAAATCTTCTTTTCTATGACTATATGGAGAATGGCTCTTTGTGGGATCTTCTTCATGGTCCCTTGAAAAAGGTAAAACTTGATTGGGAGACACGCTTGAGGATTGCTGTGGGAGCTGCTGAAGGACTTGCTTACCTCCATCATGATTGCGATCCTCGAATCATTCATAGGGATATCAAGTCATCAAATATTCTGCTAGATGAGAACTTTGAGGCTCGTCTCTCTGATTTTGGCATTGCCAAATGTCTGTCAACTACAAGAACACATGCATCAACCTTTGTTCTTGGAACAATAGGCTACATTGACCCTGAGTACGCCCGGACATCTAGGCTGAATGAAAAATCCGATGTGTATAGCTTTGGCATTGTTCTACTTGAGCTACTAACTGGGAAGAAAGCAGTGGATAATGATTGTAACTTGCATTACTTGATATTGTCCAAGGCAGATAACAACACTATAATGGAGACAGTGGATCCTGAGGTGTCCATTACCTGCATGGATCTGGCTCATGTTAAGAAGACCTTTCAGCTTGCTCTTCTTTGCACAAAAACAAATCCTTCTGAGAGGCCTACCATGCATGAGGTTGCCAGGGTTTTGGCATCACTACTCCCAGCATCTCCCACCAACATCTTTGCCCCTCCTTCAAAGACCATTGATTATGCACAATTTATGATACAAAAGGGAAACCACCCTCAAATGAACACGCCACAACCTCAGCAGAAGTACTCAAATGATCAATGGTTTGTTCGCTTTGAGGATGTTGTATCAAATAACAGCCTCTAG | 2946 | 0.4158 | MEEGVQRNLFLFLVLPMELLLLLSSFALPLSDEGQALMKIKASFSDVADVLHDWDDLQNDDFCSWHGVLCGNVSLTVLSLNLSSLNLGGEISPAIGDLVNLQSIDLQGNKLTGQIPDEIGNCAALVHLDLSDNQLYGDIPFSISKLKQLVFLNLKSNQLTGPIPSILTQLPNLKTLDLARNRLAGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCTNFEILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPILGNLTFTGKLYLHGNMITGPIPPELGNMSRLSYLQLNDNQLVGKIPDELGKLENLFELNLANNHLEGSIPLNLSSCTALNKFNVHGNHLSGSIPLSFRSLESLTFLNLSANNFKGSIPAELGHIINLDTLDLSSNNFSGHVPGSVGYLEHLLTLNLSHNSFQGPLPAEFGNLKSIQTIDMSFNYLSGSIPPDIGQLQNLVSLILNNNDLHGKIPDQLANCLSLNSLNVSYNNLSGVIPPMKNFSRFSSDSFIGNPLLCGNWLGSICDPYLPKSRVVFSKAAVVCLVVGSITLLAMVIIAIYRSSQSMQLIKGSSGNGSGPPKLVVLHMGLAIHTLDDIMRVTENLNEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQHAHNSREFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPLKKVKLDWETRLRIAVGAAEGLAYLHHDCDPRIIHRDIKSSNILLDENFEARLSDFGIAKCLSTTRTHASTFVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDCNLHYLILSKADNNTIMETVDPEVSITCMDLAHVKKTFQLALLCTKTNPSERPTMHEVARVLASLLPASPTNIFAPPSKTIDYAQFMIQKGNHPQMNTPQPQQKYSNDQWFVRFEDVVSNNSL | 981 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca08g00530 | 981 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 21 | 956 | - | - | |
Cca08g00530 | 981 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED | 21 | 956 | - | - | |
Cca08g00530 | 981 | Gene3D | Ribonuclease Inhibitor | 194 | 269 | IPR032675 | - | |
Cca08g00530 | 981 | Pfam | Leucine rich repeat | 100 | 159 | IPR001611 | GO:0005515 | |
Cca08g00530 | 981 | Pfam | Leucine rich repeat | 435 | 494 | IPR001611 | GO:0005515 | |
Cca08g00530 | 981 | SMART | LRR_typ_2 | 289 | 317 | IPR003591 | - | |
Cca08g00530 | 981 | SMART | LRR_typ_2 | 409 | 433 | IPR003591 | - | |
Cca08g00530 | 981 | SMART | LRR_typ_2 | 170 | 194 | IPR003591 | - | |
Cca08g00530 | 981 | SMART | LRR_typ_2 | 361 | 385 | IPR003591 | - | |
Cca08g00530 | 981 | SMART | LRR_typ_2 | 218 | 242 | IPR003591 | - | |
Cca08g00530 | 981 | SMART | LRR_typ_2 | 505 | 529 | IPR003591 | - | |
Cca08g00530 | 981 | SMART | LRR_typ_2 | 98 | 122 | IPR003591 | - | |
Cca08g00530 | 981 | SMART | LRR_typ_2 | 457 | 480 | IPR003591 | - | |
Cca08g00530 | 981 | Gene3D | Phosphorylase Kinase; domain 1 | 630 | 729 | - | - | |
Cca08g00530 | 981 | SMART | serkin_6 | 654 | 927 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca08g00530 | 981 | Gene3D | Ribonuclease Inhibitor | 270 | 578 | IPR032675 | - | |
Cca08g00530 | 981 | SUPERFAMILY | RNI-like | 269 | 355 | - | - | |
Cca08g00530 | 981 | SUPERFAMILY | Protein kinase-like (PK-like) | 632 | 920 | IPR011009 | - | |
Cca08g00530 | 981 | Pfam | Leucine rich repeat N-terminal domain | 31 | 70 | IPR013210 | - | |
Cca08g00530 | 981 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 775 | 787 | IPR008271 | GO:0004672|GO:0006468 | |
Cca08g00530 | 981 | Gene3D | Ribonuclease Inhibitor | 30 | 193 | IPR032675 | - | |
Cca08g00530 | 981 | ProSitePatterns | Protein kinases ATP-binding region signature. | 660 | 682 | IPR017441 | GO:0005524 | |
Cca08g00530 | 981 | Pfam | Protein kinase domain | 656 | 917 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca08g00530 | 981 | ProSiteProfiles | Protein kinase domain profile. | 654 | 924 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca08g00530 | 981 | Pfam | Leucine Rich repeat | 241 | 258 | IPR001611 | GO:0005515 | |
Cca08g00530 | 981 | SUPERFAMILY | RNI-like | 103 | 550 | - | - | |
Cca08g00530 | 981 | Gene3D | Transferase(Phosphotransferase) domain 1 | 730 | 931 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca08g00530 | Cca-Chr8 | 8627104 | 8635294 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca08g00530 | 99 | 981 | Receptor kinase-like Gene Family | AT5G07180 | 75.761 | 0.0 | 1353 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIIIb | Cca08g00530 | Pkinase | 9.8e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca08g00530 | K20718 | - | gmx:100800185 | 1699.1 |