Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00528 atgcgctcattctcggcacGTGTGGTGCTTGTCCGTGGCCGCCCCTTCTCTTCCCAATCCCTACTTCTCCATTTTCACCCTCTCTTCTTCAAACCCAAACCACTCATCTGGTTCACGCGCCCAACCGCTTCGCCCTTCCTCCTCGCTGCCGTCGGCCAGGCGAACCGGACTGCCTCCCTCAAACCACCGCCCCCAAGGTCCTCCCCGGAGACCAGAGGTTATTTGGCACCAGAGTATGCAACAAGGGGGCAGCTTACACGTAAAGCAGATGTTTACAGCTTTGGTGTCCTCCTTGTCGAGATAGTTAGTGGAAGATGTCACGCAAATACACGATTAGCAATAGGAGAGCAATTTCTTCTAGAAACGACAGAGAAGCATGTTACTAGGACTGTGTTGCTTTGCTGGCATATGAACAGCCTTCGGAATCCTACTAACTTCATAACCCCTTCCCTGTGTCCATCGGTGTGCCCTAGCCGCGCCGCTCCTACGCTCACCGACCGGTGA 504 0.5218 MRSFSARVVLVRGRPFSSQSLLLHFHPLFFKPKPLIWFTRPTASPFLLAAVGQANRTASLKPPPPRSSPETRGYLAPEYATRGQLTRKADVYSFGVLLVEIVSGRCHANTRLAIGEQFLLETTEKHVTRTVLLCWHMNSLRNPTNFITPSLCPSVCPSRAAPTLTDR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00528 167 Pfam Protein tyrosine and serine/threonine kinase 74 105 IPR001245 GO:0004672|GO:0006468
Cca08g00528 167 PANTHER OS06G0676600 PROTEIN 71 148 - -
Cca08g00528 167 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00528 167 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 148 - -
Cca08g00528 167 SUPERFAMILY Protein kinase-like (PK-like) 69 160 IPR011009 -
Cca08g00528 167 Gene3D Transferase(Phosphotransferase) domain 1 41 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00528 Cca-Chr8 8581831 8590674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00528 71 121 Receptor kinase-like Gene Family AT1G56120 58.824 1.10e-13 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca08g00528 PK_Tyr_Ser-Thr 1.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00528 - - gmx:100800503 97.8265