Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00526 ATGTTTTCTTTACAAATTTCTTTAAATAGAAGGCGTCACTATGCTAGACGTCTTGTAGTACAGGCACTTTACAAGTGTGTCGTTGGAAAACACTTCCCTCCCACCTCATGCAATCGCAAGCTCATCGGAGCTTGCTACTTCTATACCGGCTACGAAGCCACCAATGACAAAATGAATAGCACCCTCGAGTATTGCTTCGCCAGAGACTCCGACAGCAACGACACCCACACCGCCTCCATCGCCGCTGGAAGGTACGTCTTCCGGGCCTCCACCATGGGCTACGCCAAAGTAATGGCTGCCGAGACGGCTCCCAACCCTTGCCTCGCTGTCTACAAGATCTGTTGGAACGCCGATTGCTACGACTTTGACATCCTGGTTGCATTCGATGTTGTCATGGCTGACGGTGTGGACGTGATCTCCCTCAACGTGGGGGGCGTGGTGGTGCCTTACCACCTGGACGTCATCGTTGTGGGGGCCTTCGGAGCCAATGAGGTTAGCGTCTTCGTCTCTGCCTCCGTGGGGAACGGCAACCCAAGTGGCCTGACGAGGACGAATGTGGTGTTAGTTATTTACGTGTCAATAATGCTCCTATATTATAGGGCTGAATGGGGCTTCAGCCGGCCCACAGGTGGGAGCTCGACAGCAATCCTGATTTTGACTTTGAAGAACTCGGCGGTACCCTCATTGTCATTCACTGATTTTAGAGGCTCGACGACGACTCTCGATCAAACTGTGCTGATTTTTAAGGCTTCAACGGACCTATGGCTCGACGGCTGCTCTCGATCAAGCTTGGCTGATTTTAAGGCTTCAACCGACCTGCGGTGGGAGCTCGGCGGCATCCCGATTTTGACTTCGAGGAACTCGGCGGTACCCTCATTGTTGGTCACTGATTTAAGAGGCTCGACGACGGCTCTCGATCAAGTTTGGCTGATTTTAAGGCTTCAACCGACCTATGGTGGGAGCTCGGCGGCATCCCAGATTTTGACTTCGAGGAACTCGGTGGTACCCTCGTTGTTGTTCACTGATTTGAGAGGCTCGACGGCGGCTCTCGATCAAGCTTGA 1062 0.5282 MFSLQISLNRRRHYARRLVVQALYKCVVGKHFPPTSCNRKLIGACYFYTGYEATNDKMNSTLEYCFARDSDSNDTHTASIAAGRYVFRASTMGYAKVMAAETAPNPCLAVYKICWNADCYDFDILVAFDVVMADGVDVISLNVGGVVVPYHLDVIVVGAFGANEVSVFVSASVGNGNPSGLTRTNVVLVIYVSIMLLYYRAEWGFSRPTGGSSTAILILTLKNSAVPSLSFTDFRGSTTTLDQTVLIFKASTDLWLDGCSRSSLADFKASTDLRWELGGIPILTSRNSAVPSLLVTDLRGSTTALDQVWLILRLQPTYGGSSAASQILTSRNSVVPSLLFTDLRGSTAALDQA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00526 353 Gene3D Peptidase S8/S53 domain 25 186 IPR036852 GO:0004252|GO:0006508
Cca08g00526 353 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 27 186 - -
Cca08g00526 353 Pfam Subtilase family 47 181 IPR000209 GO:0006508|GO:0008236
Cca08g00526 353 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 27 186 - -
Cca08g00526 353 SUPERFAMILY Subtilisin-like 32 191 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00526 Cca-Chr8 8570769 8574916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00526 25 186 Subtilisin-like Serine Gene Family AT3G14240 63.580 4.67e-64 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00526 - - gmx:100813247 243.817