Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00502 ATGGAGTGCAATAAGGATGAGGCCACCAGAGCTAGAGAAATTGCTGAGAGGAAGTTTGCTGCAAAGGATACATTGGGTGCAAAGAAATTTGCTTTGAAGGCCCTAAATTTATTTCCTGCTCTTGAGGGTATTTCTCAAATGATAGCAACACTTGATGTTTATCTTTCTGCTGAGAATAAAACAAATGGAGAAGCAGATTGGTATGGAGTACTTGGTGTGGACCCCCTTGCTGATGATGATACAGTCAGGAAACAATACAGGAAGCTAGCTCTCATGCTTCACCCTGATAAGAACAAGTCCGTTGGAGCTGATGGGGCCTTCAAACTCATCTCAGAGGCATGGAGTTTACTATCAGACAAAACTAAAAGGGCAGCATATGACCACAGAAGTGGAAAAGCACCAAAAGTTTCTACTAAGTTTGGAGGTTCGTCAACACAAACCAGGCCTAATGGGAGTTACAATTTTGCCAAGAAGACTTCCCCTTCAAATGCATCTTCTTCGAAGAATATTGATAAAGAGCATGCATCATCTTCTACCCATAAGTCAAAAGCAAATACATTTTGGACTGTTTGCCATCGATGCAAAATGCAGTATGAGTATCTTAGTGTTTATGTTAACCTTAAACTCTTATGTCCCAACTGTCATGAGGCATTTGTTGCTAAAGAAACTGCTCCTCCACCTGCAAGTGGTATTAGGCCTGCGGCTCAATGGAATTTTTCACAGAATAATCAAAATTTCAACCGCCATTTACCTGGTAAAAGCAAATCTAATGCTTCTGGAAAGAATAAGATGGCAGTCCCAAATGCTGGAGCAGGGTCTTACAGTAAGACTAACTCCAATAAAAAAGCCAGTTTCCAGTGGGCTCCATTCTCAAAAACATCTGGTGTTTCTAATGTGGCTCAAGCTGCAAGTGTGGTTCAGCAGGCATATGATAAGGTGAAACGTGATCGTGAGGAAGCACAAGCAGCCAGCAAAAGAGAAGAGGCATTAAAAAGGAAGCAGCATGCTTCTAAAAGGAGTTACTATAATCCTGCTAAGAGAAGAAGAGGGGGCGTGGAGGAAGCAAGTGTGAGTAACCATGGTGAGGGAACAAACTCTTCTAAAAAGGGTTGTTTTGAATATAAGGTTAATGGAATCAAAAAGACCGGCAGAGTGGGAGATATCTCCCCAGTTGAACTTCGGAATCTTCTTGTGGAGAAAGCTAGAAAAGAAATTAGCAATAAACTCAAGGAAATTCAGTCAAATATTGTTGATAAAACAGTGGTGAAAGAGAGTGGAAATGACTTCCAAAAAGTGATCGAGAAAGGAGAAAATTGTTTAAGAAACTCTGAGATGTGTGCTGGAGATAATGCTGAGAAGTCAGAAGACAGAAAGAGTGGATCCCGAATGATCAAGTCATTTGCGAGTTCTAGGAAATTTTTGGAAACAACACCTGTTGATGTGCCAGATCCTGATTTCCATGATTTTTTCAAGGATCGAACTGAAAGATCTTTTGATAAAAATCAAGTATGGGCGGTGTATGATAATGATGATGGGATGCCTCGATGTTATGCAATGATTCACAACATCATCTCCCTGAATCCATTCATGATGCAGATCAGTTGGCTCAATCCGAATACCAACAGTGAACTGGGCCCCCTAAATTGGGTTGCTTCGGGCTTTTCAAAAACTTGTGGGGATTTCAGAATGAGCAGACACGAACTCTGTAGCTCAACTAATTTTTTCTCTCACAAGGTTAGGTGGAGACCAGGTACTGATGGAGCCATTTCTATATATCCCAGGAAAGGGGATGTTTGGGCCATCTATAGGAATTGGTCTCCTGACTGGAATGAACTAACAGAAGATGAGATTATACGTAAGTTTGATGTGGTTGAAGTACTAGAGGATTTTTTTGAAGGACATGGTATAGATGTTATTCCTCTGGTCAAAGTGGCTGGATACAAAACAGTATTTCATCACCACTTAGATCCAAGTGAAATCAGAATCATTCCGAGGGAAGAGATGTTTCGATTTTCTCATCAAATACCTTCACACCTACTCACTGGTCAAGAAGCTCCAGATGCTCCAAAGGGTTGCAGGGTGCTGGATCCAGCTGCTACTCCACTTGAACTTCTTCAGGTAATAGAAGTTGTGAAGGAGGAAGACATGGCAAACAACGAAGATAGTGATGTAAAAGAAACAAATGGTAGCTTGAAAAAAGACAACAATGTGGAAGTGGTCAATGATATGGGAAAACTTGAGAAAGAAAAAGGGGGAAAAGGCAAAGAGGTGCAGGAAGTAGAAACTTTGATAGAGGTCAAAGAGAAAGAAGATATGCAGTAG 2322 0.41 MECNKDEATRAREIAERKFAAKDTLGAKKFALKALNLFPALEGISQMIATLDVYLSAENKTNGEADWYGVLGVDPLADDDTVRKQYRKLALMLHPDKNKSVGADGAFKLISEAWSLLSDKTKRAAYDHRSGKAPKVSTKFGGSSTQTRPNGSYNFAKKTSPSNASSSKNIDKEHASSSTHKSKANTFWTVCHRCKMQYEYLSVYVNLKLLCPNCHEAFVAKETAPPPASGIRPAAQWNFSQNNQNFNRHLPGKSKSNASGKNKMAVPNAGAGSYSKTNSNKKASFQWAPFSKTSGVSNVAQAASVVQQAYDKVKRDREEAQAASKREEALKRKQHASKRSYYNPAKRRRGGVEEASVSNHGEGTNSSKKGCFEYKVNGIKKTGRVGDISPVELRNLLVEKARKEISNKLKEIQSNIVDKTVVKESGNDFQKVIEKGENCLRNSEMCAGDNAEKSEDRKSGSRMIKSFASSRKFLETTPVDVPDPDFHDFFKDRTERSFDKNQVWAVYDNDDGMPRCYAMIHNIISLNPFMMQISWLNPNTNSELGPLNWVASGFSKTCGDFRMSRHELCSSTNFFSHKVRWRPGTDGAISIYPRKGDVWAIYRNWSPDWNELTEDEIIRKFDVVEVLEDFFEGHGIDVIPLVKVAGYKTVFHHHLDPSEIRIIPREEMFRFSHQIPSHLLTGQEAPDAPKGCRVLDPAATPLELLQVIEVVKEEDMANNEDSDVKETNGSLKKDNNVEVVNDMGKLEKEKGGKGKEVQEVETLIEVKEKEDMQ 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00502 773 PANTHER BNAC03G44070D PROTEIN 1 706 - -
Cca08g00502 773 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Cca08g00502 773 Coils Coil 306 333 - -
Cca08g00502 773 MobiDBLite consensus disorder prediction 316 368 - -
Cca08g00502 773 MobiDBLite consensus disorder prediction 127 179 - -
Cca08g00502 773 Pfam DnaJ domain 66 127 IPR001623 -
Cca08g00502 773 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Cca08g00502 773 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Cca08g00502 773 PRINTS DnaJ domain signature 68 86 IPR001623 -
Cca08g00502 773 PRINTS DnaJ domain signature 86 101 IPR001623 -
Cca08g00502 773 PRINTS DnaJ domain signature 102 122 IPR001623 -
Cca08g00502 773 PRINTS DnaJ domain signature 122 141 IPR001623 -
Cca08g00502 773 MobiDBLite consensus disorder prediction 716 737 - -
Cca08g00502 773 PANTHER BNAA04G14940D PROTEIN 1 706 - -
Cca08g00502 773 MobiDBLite consensus disorder prediction 316 335 - -
Cca08g00502 773 SMART dnaj_3 65 122 IPR001623 -
Cca08g00502 773 MobiDBLite consensus disorder prediction 137 172 - -
Cca08g00502 773 CDD DnaJ 66 119 IPR001623 -
Cca08g00502 773 Pfam Domain of unknown function (DUF3444) 478 684 IPR024593 -
Cca08g00502 773 Gene3D DnaJ domain 54 147 IPR036869 -
Cca08g00502 773 MobiDBLite consensus disorder prediction 252 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00502 Cca-Chr8 8127076 8129397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00502 4 350 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.577 2.14e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00502 - - gmx:100816712 1185.24