Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00476 ATGCCTTCAACAACCAATAAACTCTCAAACACTCATACAATGCCTTCCTCCCAAACACCACAACCGCTTCTTCCTTGGAAGACCCGTCTCCAAATATATTTCCTCACTGCAGCAACTGACGCCGTTCGCCGCTCTAACGGCACCGTTAACCGCCGTCTCATGAACTTCCTCGACCGTAAAACCCACCCCAACAAAGCCCCCATTAACGCCGTTTCCGTCCAAGACGTCACCGTCGATGCCACACGAAACCTCTGGTTCCGCCTATTCAcccccgccgccgccgccgcaggcctccccgtcgTTATTTTCTTCCACGGCGGCGGATTCGCCTTCCTCTCGCCGGATTCCTTCGTCTACGACGCCTTCTGCCGGCGCTTATGCCGGCGAGTCCCCGCCGTCGTGGTCTCCGTCAACTACCGCCACACGCCGGAGCACCGGTGGCCTTCCCAATACGACGACGGCGAGGACGTGCTCAAATTCCTCGCCGAGAATCCCGGGGTGTTGCCGGAAAATGCTGACGTGTCAAAGTGCTTTCTCGCCGGCGACAGCGCCGGCGCCAACATTGCGCATCATGTTGCGGTTCGGGTCGGGAAGTCGGGGCTCCGGGGAATTCGGGTCGTCGGGTTGGTGTCCATCCAGCCGTGGTTCGGCGGGGAGGGGGGGACGGCGGCGGAGGAGCGGCTGGATGCGGTGCCGATTGTGTCGGTGGCGAGGACGGACTGGCTGTGGAAGGCCTTTTTACCGGCCGGGTCGGATCGCGATCACGGAGCGGTGAATGTGTGTGGGCCGAATTCGGAGGATTTGTCGGGTTTGGATTACCCGGAAACTGTGGTGTTTGTGGGTGGGTTTGACCCGTTACAAGATTGGCAAAAGAGGTACTATGAGTGGTTGAAAAATTGTGGGAAAAAGGCTGAATTGATTGAGTATCCAACTATGATTCATGCTTTTTATTTATTCCCTGAATTGCCTGAGTCATCTGAATTTATCTCACAAGTCAAGGATTTCATCACCAAGAGAATCTCCCATTTGTAA 1032 0.5368 MPSTTNKLSNTHTMPSSQTPQPLLPWKTRLQIYFLTAATDAVRRSNGTVNRRLMNFLDRKTHPNKAPINAVSVQDVTVDATRNLWFRLFTPAAAAAGLPVVIFFHGGGFAFLSPDSFVYDAFCRRLCRRVPAVVVSVNYRHTPEHRWPSQYDDGEDVLKFLAENPGVLPENADVSKCFLAGDSAGANIAHHVAVRVGKSGLRGIRVVGLVSIQPWFGGEGGTAAEERLDAVPIVSVARTDWLWKAFLPAGSDRDHGAVNVCGPNSEDLSGLDYPETVVFVGGFDPLQDWQKRYYEWLKNCGKKAELIEYPTMIHAFYLFPELPESSEFISQVKDFITKRISHL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00476 343 SUPERFAMILY alpha/beta-Hydrolases 54 339 IPR029058 -
Cca08g00476 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 101 117 IPR002168 GO:0016787
Cca08g00476 343 PANTHER CARBOXYLESTERASE 18-RELATED 17 339 - -
Cca08g00476 343 MobiDBLite consensus disorder prediction 1 22 - -
Cca08g00476 343 PANTHER ARYLACETAMIDE DEACETYLASE 17 339 - -
Cca08g00476 343 Gene3D alpha/beta hydrolase 13 342 IPR029058 -
Cca08g00476 343 Pfam alpha/beta hydrolase fold 101 317 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00476 Cca-Chr8 7758293 7759454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00476 9 337 Carbohydrate Esterase AT3G05120 37.681 2.89e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00476 - - gmx:100812296 534.258