Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00473 ATGGAAACTGCAACCCTTCCATGGAAACATCGCTTACTCATTGCCCTCCTTTCCACCCTCGCCGACGCCTCTCGACGCTCCGACGCCACCATCAACCGCCGCCTCTTCAGCCTCACCGACCGCAAGGCCCCCGCTATCCCCACCTCCGTCCACGCCCTCTCCTCCTCCGACGTCACCGTTCACGCCGCCCGCAACCTCTGGTtccgcctcttcatcccctcctcctccgccgcctccctccccgtcatcgtcTACTTCCACGGCGGCGCCTTCGCCTTCTTCGCCGCGGACTCCGCCCCCTACGACGCCGTCTGTCGCCTCCTCTGTCGCTCCCTTAACGCCGTCGTCGTCTCCGTTAACTACCGCCTGGCACCCGAACACCGTTACCCCGCGCAATACGACGACGGTGTCGACGTCCTGAAATTCCTCGACCAAAACGGCGCCGTTTTGCCTCGTTCCGCTGACGTCAGCAAGTGTTTTTTGGCGGGGGATAGCGCGGGTGCCAACCTGGCACACCACGTGGCGGTTCGGGTTTCCAAAGAGGGGCTCCGAACCGTGAATGTCATCGGGTTGGTTTCGGTTCAACCCTTTTTCGGAGGAGAGGAGCGGACCCAATCCGAAATTGAATTGACCCGGGTTCCGATTATTTCGGTGGATCGGTGCGATTGGCACTGGAAGGCGTTTTTGCCGAATGGGTTGGGCCGGGACCATGAATCGGTTAACGTGAGTGGGCCCAATGCGGTGGATATTTCGGGCCTGGATTACCCGAATACGATTGTGTTTATGGGTGGGCTTGACCCGTTGCGCGATTGGCAAAGGAAGTATTATGAGTGGTTAAGGAAATCGGGGAAGATGGCTGAGTTAATCGATTATCCAAACGCCATTCACGCTTTTTACTTGTTTCCTGATTTGCCTGAGACTTCTTTCTTTGTTTCTCAAGTGAAGGAGTTTATGATCAAGCAAATGTCCAATGTGAACTGA 981 0.5362 METATLPWKHRLLIALLSTLADASRRSDATINRRLFSLTDRKAPAIPTSVHALSSSDVTVHAARNLWFRLFIPSSSAASLPVIVYFHGGAFAFFAADSAPYDAVCRLLCRSLNAVVVSVNYRLAPEHRYPAQYDDGVDVLKFLDQNGAVLPRSADVSKCFLAGDSAGANLAHHVAVRVSKEGLRTVNVIGLVSVQPFFGGEERTQSEIELTRVPIISVDRCDWHWKAFLPNGLGRDHESVNVSGPNAVDISGLDYPNTIVFMGGLDPLRDWQRKYYEWLRKSGKMAELIDYPNAIHAFYLFPDLPETSFFVSQVKEFMIKQMSNVN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00473 326 SUPERFAMILY alpha/beta-Hydrolases 36 318 IPR029058 -
Cca08g00473 326 Pfam alpha/beta hydrolase fold 83 299 IPR013094 GO:0016787
Cca08g00473 326 Gene3D alpha/beta hydrolase 1 325 IPR029058 -
Cca08g00473 326 PANTHER ACETYL ESTERASE 4 321 - -
Cca08g00473 326 PANTHER ARYLACETAMIDE DEACETYLASE 4 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00473 Cca-Chr8 7720239 7721416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00473 4 312 Carbohydrate Esterase AT3G05120 36.747 7.79e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00473 - - gmx:100799815 511.916