Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00457 atggttagagaacaatcaaatttgccagagaaaagaaataggttgtggTTTTGTGAGGACATTGTTCGTGCTTTGGACAAAAACACGGAATATGAAATTGAAGTCATGATGTTAGACATGCCAAAAGATCTAAAAGTTCAATGGAATCAAACGGTGTATAGAAAAATGAAAAATCTACAAATGATGCTCGTAAAAAGTAGTGTTGCCTCTCTTAGAATGCCTAAGGATCTCCCAAACAGTTTGAGGGTGCTGGAATGGTGGGGATACCCTGGAGCTTCTTTACCATCTAATTTTCATTTGAAGAATCTTGTCATACTCAACTTGTCATACAGTTGCTTTCGATGGGACAAACCACTTGAGGCATGTCTAATTATTTATAAACAGTTGGTTCTTAAAGGTTGTAAGAACATAAGACGAATTCCAGACATGTCTGGTTTGCCCAATTTGACAGAATTATGTCTTGCTGAATGCACAAATTTGATTAAAATTCATGATTCAGTAGGATTTTTACATAATCTTCAATGGTTTTGTGCTGAAGGATGTACCAAACTCGGGATTTTCCCACGTTGCATAAAGTTGACATCTCTTGAACATCTTTGCATTAAGGATTGCAGTAGTCTTGTTATGTTGCCCGAAATATTGGCACCAATGCAGAAACTAAAATATGTTGACTTGGACGGAACTTCCATAAAACATCTGCCACGTTCAATGCAGAATCTTAAAGGCCTTCAATTCTTATCCATGAATAGATGCAAAATGCTTGAAATTAATGGGCGTTCCAATGTCGTTCAAATGCTGCCAAAATTGTTTCCCTATTTGAAAGAATTATTGTTAGATGAATCAAGTTTGACAATCATTCCTGCATGCATTGAAGAGTGTCACTACTTGTATCATCTAAGTTTGTATAACTGCAAGAAGCTTCGAGAAATAAGAGGCCTTCCACCAAACATGACTAGACTCACGGCAGAAAACAGTCTTGTGGAAGTAGATTCATCAACTTTAAACATGTTAGTCAGACGGGCAATTAGTTCTACTACGATATTATACTATATTCTACCATGTCAACAAGTCCCAGAATTGTTTGACCACTCTAGCAAGGGAAACTCTCTTTGCTTTTGGTTTCGTAATGAATTGCCCTCTCTCACTGTGTGTTTTGTTTCTGGAGTTTTGGGCAATATCAAGCCTCCTTTCTATGTGAATTTGAATTTCTTTGCTAGAATCAATGATGTTGACTTGTGTGTTAATTGTTTCTGTTGGTATAATGTAATTTGCATTTCTGAGAATGACCATATATTTATGTTCAATCTTCAAAATCATTTTCACCATCCTATGAATTCCGATATTAGAAGAGCACTTGAGACGAATGAGTGGATTCATGGGAAGGTTTCGTTTGTGATGACATCACCTGAAAAATATTCACGTAGATTGGGAGGAGTAATCAAATGGATCGGAGTTTATGTAAATCGGAGATTTAGTAGAATGGAGAATGTTCGGTTCACAAATCCTTATACTTCCAATAATACAAGTGACGTGGGAAAAAAGTTTGTGTTGCTTGGTGAGGCACCTGATATACAACAACAACAACCTTTGAATTATGTGTATAGTGATTCAGATCGACAAGAACCAGAAAACACTATTGACTACTCCAATGAGCAAGATGGAGCATTTTCGGAAAATGTCAAGGCCGAGAGAGAGAAATTGGAACCCTGA 1710 0.3585 MVREQSNLPEKRNRLWFCEDIVRALDKNTEYEIEVMMLDMPKDLKVQWNQTVYRKMKNLQMMLVKSSVASLRMPKDLPNSLRVLEWWGYPGASLPSNFHLKNLVILNLSYSCFRWDKPLEACLIIYKQLVLKGCKNIRRIPDMSGLPNLTELCLAECTNLIKIHDSVGFLHNLQWFCAEGCTKLGIFPRCIKLTSLEHLCIKDCSSLVMLPEILAPMQKLKYVDLDGTSIKHLPRSMQNLKGLQFLSMNRCKMLEINGRSNVVQMLPKLFPYLKELLLDESSLTIIPACIEECHYLYHLSLYNCKKLREIRGLPPNMTRLTAENSLVEVDSSTLNMLVRRAISSTTILYYILPCQQVPELFDHSSKGNSLCFWFRNELPSLTVCFVSGVLGNIKPPFYVNLNFFARINDVDLCVNCFCWYNVICISENDHIFMFNLQNHFHHPMNSDIRRALETNEWIHGKVSFVMTSPEKYSRRLGGVIKWIGVYVNRRFSRMENVRFTNPYTSNNTSDVGKKFVLLGEAPDIQQQQPLNYVYSDSDRQEPENTIDYSNEQDGAFSENVKAEREKLEP 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00457 569 PANTHER NB-ARC DOMAIN PROTEIN 255 393 - -
Cca08g00457 569 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 267 IPR044974 GO:0006952
Cca08g00457 569 MobiDBLite consensus disorder prediction 528 569 - -
Cca08g00457 569 SUPERFAMILY L domain-like 34 396 - -
Cca08g00457 569 Gene3D Ribonuclease Inhibitor 42 191 IPR032675 -
Cca08g00457 569 Gene3D Ribonuclease Inhibitor 192 345 IPR032675 -
Cca08g00457 569 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 255 393 IPR044974 GO:0006952
Cca08g00457 569 PANTHER NB-ARC DOMAIN PROTEIN 7 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00457 Cca-Chr8 7379809 7423411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00457 3 331 WRKY Transcription Factor Family AT4G12020 31.792 5.72e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00457 - - ccaj:109793522 867.455