Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00456 ATGATGCTAGACATGCCAGAAGATCAAGAAGTGAAATGGAATCAAAAGGTGTTTGGAAAACTGAAAAACTTACGAATGATGCTAATAAAAAGGAATCCGAAGTGTTTTAGAAGCCTTAAAGATCTCCCAAACGAGTTGAGAGTATTGGAATGGTTGGGATATCCTAGAGCTTCTTTACCATCTAATTTTCATTTGAAGAATCTTGTAATACTCAACTTGTCATATAGTTACTTTCAATGGGCCAAACCACTCCAGAATTCAAAATTTTTGAGACACTTGATTCTGAGAGGCTGTAAATATCTAAGAAGAATACCAAACATATCTTGTTTCCCAAGTTTGACTGAATTGTGTATTTGTGAATGCACAAATTTGACCAAGATTCATGATTCTGTTGGATACTTGCATAATCTTCAAAGGTTTTGTGCCGAAGGATGTACAAAGCTCATGATTTGTCCACGTGGCATAAAGCTGACATCTCTAGAATATCTTAGTCTTCGCAACTGCATCAATCTTGTTATTCTTCCAGAAATATTGTTACCAATGAACAAACTAAAATTTGTTGACTTGGGAGGAACTTCCATAAAAGGGCTTCCACTTTCAATGCAAAATCTTGAGGGCCTTCAAATCTTATCCCTAGAGGGATGCAAAAAGCTTGAAATTGATGGGTCGTTCAATTTCTTTCAAATGCTACCACAGTTCTTTCACAATTTGACACAATTGATTTTACGAGATTCAAATTTGACTATACTTCCAGGATGCATTGAAAAATGTCACTCCTTGAAACATTTAGATGTTTCTAATTGTAAGAGGCTTCAAGAAATTAGAGGGCTTCCACGAAACACAACTCACTTTTGGGCACATAGAACTCTCGTGGAAGCTGATTCTTCAACTTTAAACATGTTACTCAGACGGGCAATTGTTTCTTCTACAATATGTTGTTATTCTCTCCAAGGTCAACGAATCCCAGAATGGTTTGACCACTCTACTAAGGGAAACTCTATGTGTTTATGTTGGGGTAAAGTCGATTGTGTTTCTAAGAATGGCCATATATTTGTGCTCAACCTTCAACCTCATTTCCACCATCCATTGGATTTGGCTATTGAAAGAGCACTTTCTACAAAAGAGTGGATTCGAGGGGATGTTTTGATTACGATGGGTTCTGAAGAAGATCGTAGTTTAGGAGTGGTCGAATGGATTGGAGTTTATGTAAACCGAGCATTTAGTAGCATGGAGGATGTTAGGTTCACATATCCTTATTCTCCCAATGATACACATGTTGAAGGAACTTGA 1290 0.3705 MMLDMPEDQEVKWNQKVFGKLKNLRMMLIKRNPKCFRSLKDLPNELRVLEWLGYPRASLPSNFHLKNLVILNLSYSYFQWAKPLQNSKFLRHLILRGCKYLRRIPNISCFPSLTELCICECTNLTKIHDSVGYLHNLQRFCAEGCTKLMICPRGIKLTSLEYLSLRNCINLVILPEILLPMNKLKFVDLGGTSIKGLPLSMQNLEGLQILSLEGCKKLEIDGSFNFFQMLPQFFHNLTQLILRDSNLTILPGCIEKCHSLKHLDVSNCKRLQEIRGLPRNTTHFWAHRTLVEADSSTLNMLLRRAIVSSTICCYSLQGQRIPEWFDHSTKGNSMCLCWGKVDCVSKNGHIFVLNLQPHFHHPLDLAIERALSTKEWIRGDVLITMGSEEDRSLGVVEWIGVYVNRAFSSMEDVRFTYPYSPNDTHVEGT 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00456 429 SUPERFAMILY L domain-like 2 286 - -
Cca08g00456 429 Gene3D Ribonuclease Inhibitor 11 155 IPR032675 -
Cca08g00456 429 Gene3D Ribonuclease Inhibitor 156 296 IPR032675 -
Cca08g00456 429 PANTHER ARCHAEAL ATPASE 5 340 - -
Cca08g00456 429 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 340 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00456 Cca-Chr8 7348472 7355508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00456 14 295 WRKY Transcription Factor Family AT4G12020 29.470 1.16e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00456 - - ccaj:114915446 556.599