Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00455 ATGACTTGGTTCGATCTATGGGAAAAGAAATGGTTAGAGAACAATCAAATTTGCCAGAGAAAAGAAATAGGTTGTGGTTTTTTTGAGGACATTGTTCGTGCTTTGGACAAAAACACGGAAAATGAAATTGAAGTCATGATGTTAGACATGCCAAAATATCTAAAAGTTCAATGGAATCAAACGGTGTATAGAAAAATGAAAAATCTACAAATGATGCTCGTAAAAAGTAGTGTTGCCTCTCTTAGAATGCCTAAGGATCTCCCAAACAGTTTGAGGGTGCTGGAATGGTGGGGATACCCTGGAGCTTCTTTACCATCTAATTTTCATTTGAAGAATCTTGTCATACTCAACTTGTCATACAGTTGCTTTCGATGGGACAAACCACTTGAGAATTCGAAGATGTTGAGACAGTTGGTTCTTAAAGGTTGTAAGAACATAAGACGAGTTCCAGACATGTCTGGTTTGCCCAATTTGACAGAATTATGTCTTGCTGAATGCACAAATTTGATTAAAATTCATGATTCAGTAGGGTTTTTACATAATCTTCAATTGTTTTGTAGTAATCTCTTGAACATCTTTGCATTAAGGATTGCAGTAATCCCACGTCGCATAAAGTTGACATCTCTTGAACATCTTTGCATTAAGGATTGCAGTAATCTTGTTATGTTGCCCGAAATATTGGCACCAATGCAGAAACTAAAATATGTTGACTTGGAAGGAACTTCCATAAAAAATCTGCCACGTTCAATTCAGAATCTTAAAGGCCTTCAAATCTTATCCATGAATAGATGCAAAATGCTTGAAGTTAATGGGCGTTCCAATGTCGTTCAAATGCTGCCAAAATTATTTCCCTATTTGAAAGAATTATTGTTAAATGAATCAAGTTTGACAATAATTCCTGCATGCATTGAAGAGTGTCACTCCTTGGATACTCTAAGTCTGTATAACTGCAAGAAGCTTCGAGAAATAAGAGGCCTTCCGCCAAACATGGCTAGACTAGGGGCAGAAAACAGTCTTGTGGAAGTAGATTCATCAACTTTAAACATGTTAGTCAGACGGGCAATTAATTCTTCTGGAATAAATACATATGTTTTGCCAGATCAAGCAACTAATGATTTTGCTGGAATATTTCATAGTTCTACTGTAAGTAGAGGAGTTCGGGTTGAATCTAACAAACATGATTGTGCATTTCAAACATCTTTTCCAGACATCTCAGATGATGATCTTCGTGAAACTGCATATGAGATCCTCTTGGCTTGTGTCAGAGCCACAGGGAGTCTGATTGTCCCATCAAAAGAAAAAAAGAAAGTCTTAGTAAAAGAAATTGTCATTCTTATTGATTGA 1344 0.3631 MTWFDLWEKKWLENNQICQRKEIGCGFFEDIVRALDKNTENEIEVMMLDMPKYLKVQWNQTVYRKMKNLQMMLVKSSVASLRMPKDLPNSLRVLEWWGYPGASLPSNFHLKNLVILNLSYSCFRWDKPLENSKMLRQLVLKGCKNIRRVPDMSGLPNLTELCLAECTNLIKIHDSVGFLHNLQLFCSNLLNIFALRIAVIPRRIKLTSLEHLCIKDCSNLVMLPEILAPMQKLKYVDLEGTSIKNLPRSIQNLKGLQILSMNRCKMLEVNGRSNVVQMLPKLFPYLKELLLNESSLTIIPACIEECHSLDTLSLYNCKKLREIRGLPPNMARLGAENSLVEVDSSTLNMLVRRAINSSGINTYVLPDQATNDFAGIFHSSTVSRGVRVESNKHDCAFQTSFPDISDDDLRETAYEILLACVRATGSLIVPSKEKKKVLVKEIVILID 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00455 447 Gene3D Ribonuclease Inhibitor 192 351 IPR032675 -
Cca08g00455 447 Gene3D Ribonuclease Inhibitor 52 191 IPR032675 -
Cca08g00455 447 SUPERFAMILY L domain-like 41 333 - -
Cca08g00455 447 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 380 IPR044974 GO:0006952
Cca08g00455 447 PANTHER ARCHAEAL ATPASE 29 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00455 Cca-Chr8 7278334 7280685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00455 43 370 WRKY Transcription Factor Family AT4G12020 29.226 9.76e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00455 - - ccaj:114915427 717.227